Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.53□□□□□ -0.4
Tnfsf11O35235 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.53□□□□□ -0.4
Tnfsf11O35235 Gm18958-201ENSMUST00000174258 762 ntBASIC12.53□□□□□ -0.4
Tnfsf11O35235 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf11O35235 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf11O35235 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Tnfsf11O35235 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf11O35235 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf11O35235 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.52□□□□□ -0.41
Tnfsf11O35235 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.52□□□□□ -0.41
Tnfsf11O35235 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf11O35235 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Tnfsf11O35235 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Gm27275-201ENSMUST00000184318 272 ntBASIC12.51□□□□□ -0.41
Tnfsf11O35235 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.51□□□□□ -0.41
Tnfsf11O35235 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.51□□□□□ -0.41
Tnfsf11O35235 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf11O35235 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms