Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col15a1O35206 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col15a1O35206 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col15a1O35206 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col15a1O35206 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col15a1O35206 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.4■□□□□ 0.86
Col15a1O35206 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col15a1O35206 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Col15a1O35206 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col15a1O35206 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col15a1O35206 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col15a1O35206 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col15a1O35206 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Col15a1O35206 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Col15a1O35206 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col15a1O35206 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col15a1O35206 Gm6226-201ENSMUST00000117765 1146 ntBASIC20.4■□□□□ 0.86
Col15a1O35206 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col15a1O35206 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Col15a1O35206 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col15a1O35206 Gm44335-201ENSMUST00000196879 141 ntBASIC20.4■□□□□ 0.86
Col15a1O35206 Gm44297-201ENSMUST00000198304 141 ntBASIC20.4■□□□□ 0.86
Col15a1O35206 Gm44346-201ENSMUST00000198851 141 ntBASIC20.4■□□□□ 0.86
Col15a1O35206 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Col15a1O35206 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Col15a1O35206 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
Col15a1O35206 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col15a1O35206 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col15a1O35206 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col15a1O35206 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col15a1O35206 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col15a1O35206 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col15a1O35206 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col15a1O35206 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.39■□□□□ 0.85
Col15a1O35206 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.39■□□□□ 0.85
Col15a1O35206 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col15a1O35206 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col15a1O35206 Gm14057-201ENSMUST00000120631 482 ntBASIC20.39■□□□□ 0.85
Col15a1O35206 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col15a1O35206 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col15a1O35206 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col15a1O35206 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col15a1O35206 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col15a1O35206 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col15a1O35206 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col15a1O35206 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col15a1O35206 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col15a1O35206 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Col15a1O35206 Gm27301-201ENSMUST00000184012 127 ntBASIC20.38■□□□□ 0.85
Col15a1O35206 AC127302.2-201ENSMUST00000215212 268 ntBASIC20.38■□□□□ 0.85
Col15a1O35206 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC20.38■□□□□ 0.85
Col15a1O35206 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col15a1O35206 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Col15a1O35206 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.38■□□□□ 0.85
Col15a1O35206 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.38■□□□□ 0.85
Col15a1O35206 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col15a1O35206 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col15a1O35206 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.37■□□□□ 0.85
Col15a1O35206 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col15a1O35206 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC20.37■□□□□ 0.85
Col15a1O35206 Gm11745-201ENSMUST00000121669 448 ntBASIC20.37■□□□□ 0.85
Col15a1O35206 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col15a1O35206 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Col15a1O35206 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC20.37■□□□□ 0.85
Col15a1O35206 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col15a1O35206 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col15a1O35206 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Col15a1O35206 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col15a1O35206 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col15a1O35206 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col15a1O35206 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.37■□□□□ 0.85
Col15a1O35206 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col15a1O35206 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Col15a1O35206 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col15a1O35206 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col15a1O35206 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC20.36■□□□□ 0.85
Col15a1O35206 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col15a1O35206 Gm5312-201ENSMUST00000203728 547 ntBASIC20.36■□□□□ 0.85
Col15a1O35206 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC20.36■□□□□ 0.85
Col15a1O35206 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.36■□□□□ 0.85
Col15a1O35206 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Col15a1O35206 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col15a1O35206 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col15a1O35206 Nrn1-204ENSMUST00000224323 1779 ntBASIC20.36■□□□□ 0.85
Col15a1O35206 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms