Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf11bO08712 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf11bO08712 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Tnfrsf11bO08712 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.27■□□□□ 0.19
Tnfrsf11bO08712 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnfrsf11bO08712 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnfrsf11bO08712 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnfrsf11bO08712 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Tnfrsf11bO08712 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf11bO08712 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms