Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Gm7729-201ENSMUST00000050143 801 ntBASIC17.16■□□□□ 0.34
Usp35M0QWN7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp35M0QWN7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.15■□□□□ 0.34
Usp35M0QWN7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp35M0QWN7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp35M0QWN7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.15■□□□□ 0.34
Usp35M0QWN7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp35M0QWN7 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.15■□□□□ 0.34
Usp35M0QWN7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp35M0QWN7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Usp35M0QWN7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp35M0QWN7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp35M0QWN7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.15■□□□□ 0.34
Usp35M0QWN7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp35M0QWN7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.15■□□□□ 0.34
Usp35M0QWN7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp35M0QWN7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp35M0QWN7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.14■□□□□ 0.33
Usp35M0QWN7 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.14■□□□□ 0.33
Usp35M0QWN7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Gm12644-201ENSMUST00000119935 606 ntBASIC17.14■□□□□ 0.33
Usp35M0QWN7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.14■□□□□ 0.33
Usp35M0QWN7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp35M0QWN7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.13■□□□□ 0.33
Usp35M0QWN7 Gm44430-201ENSMUST00000203376 995 ntBASIC17.13■□□□□ 0.33
Usp35M0QWN7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.13■□□□□ 0.33
Usp35M0QWN7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp35M0QWN7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.12■□□□□ 0.33
Usp35M0QWN7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms