Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Gm5312-201ENSMUST00000203728 547 ntBASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
B020004C17RikJ3QP07 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Gm13616-201ENSMUST00000120600 222 ntBASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
B020004C17RikJ3QP07 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.8■□□□□ 0.44
B020004C17RikJ3QP07 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Gm13365-201ENSMUST00000121188 973 ntBASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
B020004C17RikJ3QP07 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.78■□□□□ 0.44
B020004C17RikJ3QP07 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms