Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13d-3J3QMG8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
Trav13d-3J3QMG8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.08□□□□□ -0.15
Trav13d-3J3QMG8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13d-3J3QMG8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Gm27704-201ENSMUST00000185094 107 ntBASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav13d-3J3QMG8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Gm33142-201ENSMUST00000193913 867 ntBASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-3J3QMG8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Gm13312-201ENSMUST00000119631 718 ntBASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Gm7284-201ENSMUST00000131667 944 ntBASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Mir6404-201ENSMUST00000183699 94 ntBASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms