Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh1F7BJK1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Gm27463-201ENSMUST00000183569 57 ntBASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Gm29707-201ENSMUST00000196325 491 ntBASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh1F7BJK1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh1F7BJK1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms