Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf6F6VAN0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.47■□□□□ 0.23
Atf6F6VAN0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atf6F6VAN0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf6F6VAN0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf6F6VAN0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf6F6VAN0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atf6F6VAN0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.46■□□□□ 0.23
Atf6F6VAN0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.46■□□□□ 0.23
Atf6F6VAN0 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.46■□□□□ 0.23
Atf6F6VAN0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Atf6F6VAN0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6F6VAN0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Atf6F6VAN0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Atf6F6VAN0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Atf6F6VAN0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.45■□□□□ 0.22
Atf6F6VAN0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6F6VAN0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Atf6F6VAN0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6F6VAN0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms