Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh17E9PXF0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Gm36967-201ENSMUST00000193814 266 ntBASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh17E9PXF0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Gm13216-201ENSMUST00000117145 591 ntBASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh17E9PXF0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Mir5131-201ENSMUST00000175426 93 ntBASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Gm7506-201ENSMUST00000207758 815 ntBASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms