Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Arhgef33-209ENSMUST00000225223 714 ntBASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Hfm1D3Z4R1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Hfm1D3Z4R1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC22.33■■□□□ 1.17
Hfm1D3Z4R1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC22.33■■□□□ 1.17
Hfm1D3Z4R1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Hfm1D3Z4R1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Hfm1D3Z4R1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Hfm1D3Z4R1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
Hfm1D3Z4R1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Hfm1D3Z4R1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Hfm1D3Z4R1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Hfm1D3Z4R1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Hfm1D3Z4R1 Gm5898-201ENSMUST00000121016 2071 ntBASIC22.33■■□□□ 1.16
Hfm1D3Z4R1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC22.33■■□□□ 1.16
Hfm1D3Z4R1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Hfm1D3Z4R1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Hfm1D3Z4R1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hfm1D3Z4R1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Hfm1D3Z4R1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC22.32■■□□□ 1.16
Hfm1D3Z4R1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC22.32■■□□□ 1.16
Hfm1D3Z4R1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hfm1D3Z4R1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hfm1D3Z4R1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Hfm1D3Z4R1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Hfm1D3Z4R1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hfm1D3Z4R1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Hfm1D3Z4R1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
Hfm1D3Z4R1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Hfm1D3Z4R1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hfm1D3Z4R1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Gm5745-201ENSMUST00000183748 313 ntBASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Hfm1D3Z4R1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Gm5184-201ENSMUST00000220417 1702 ntBASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Gm43438-201ENSMUST00000198133 379 ntBASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Gm18057-201ENSMUST00000208220 503 ntBASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hfm1D3Z4R1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 AC140375.2-201ENSMUST00000225283 584 ntBASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 Gm13410-201ENSMUST00000117058 1415 ntBASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hfm1D3Z4R1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms