Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Gm44335-201ENSMUST00000196879 141 ntBASIC14.29□□□□□ -0.12
Shank1D3YZU1 Gm44297-201ENSMUST00000198304 141 ntBASIC14.29□□□□□ -0.12
Shank1D3YZU1 Gm44346-201ENSMUST00000198851 141 ntBASIC14.29□□□□□ -0.12
Shank1D3YZU1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Gm8396-201ENSMUST00000057361 823 ntBASIC14.29□□□□□ -0.12
Shank1D3YZU1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.29□□□□□ -0.12
Shank1D3YZU1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shank1D3YZU1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shank1D3YZU1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Gm13597-201ENSMUST00000121239 375 ntBASIC14.28□□□□□ -0.12
Shank1D3YZU1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shank1D3YZU1 AA543401-201ENSMUST00000164248 1269 ntBASIC14.28□□□□□ -0.12
Shank1D3YZU1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Gm27300-201ENSMUST00000184085 97 ntBASIC14.28□□□□□ -0.12
Shank1D3YZU1 Gm27335-201ENSMUST00000184758 97 ntBASIC14.28□□□□□ -0.12
Shank1D3YZU1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.28□□□□□ -0.12
Shank1D3YZU1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shank1D3YZU1 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.28□□□□□ -0.12
Shank1D3YZU1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shank1D3YZU1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Shank1D3YZU1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Shank1D3YZU1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shank1D3YZU1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.27□□□□□ -0.12
Shank1D3YZU1 Gm17968-201ENSMUST00000194902 784 ntBASIC14.27□□□□□ -0.12
Shank1D3YZU1 Gm20949-201ENSMUST00000206478 952 ntBASIC14.27□□□□□ -0.12
Shank1D3YZU1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Shank1D3YZU1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shank1D3YZU1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Shank1D3YZU1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shank1D3YZU1 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.27□□□□□ -0.12
Shank1D3YZU1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shank1D3YZU1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Shank1D3YZU1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shank1D3YZU1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.27□□□□□ -0.13
Shank1D3YZU1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shank1D3YZU1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms