Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Gm10499-201ENSMUST00000174094 934 ntBASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn7aB1AYL1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn7aB1AYL1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Gm6226-201ENSMUST00000117765 1146 ntBASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Gm43474-201ENSMUST00000196415 774 ntBASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Gm5628-201ENSMUST00000222318 1049 ntBASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Gm25948-201ENSMUST00000175334 112 ntBASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Gm20553-201ENSMUST00000204205 844 ntBASIC20.48■□□□□ 0.87
Scn7aB1AYL1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Gm7063-201ENSMUST00000186840 981 ntBASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn7aB1AYL1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.46■□□□□ 0.87
Scn7aB1AYL1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC20.46■□□□□ 0.87
Scn7aB1AYL1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scn7aB1AYL1 Rprl2-201ENSMUST00000157150 290 ntBASIC20.46■□□□□ 0.87
Scn7aB1AYL1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.46■□□□□ 0.87
Scn7aB1AYL1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn7aB1AYL1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scn7aB1AYL1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Scn7aB1AYL1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scn7aB1AYL1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn7aB1AYL1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn7aB1AYL1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms