Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Gm22240-201ENSMUST00000175225 82 ntBASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Gm27011-201ENSMUST00000182352 972 ntBASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Gm27000-201ENSMUST00000182943 842 ntBASIC14.21□□□□□ -0.13
Gm11127A7VMS2 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Gm10812-201ENSMUST00000099864 546 ntBASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm11127A7VMS2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Gm11127A7VMS2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Gm11127A7VMS2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.21□□□□□ -0.14
Gm11127A7VMS2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Gm715-201ENSMUST00000117865 831 ntBASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm11127A7VMS2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Gm7791-201ENSMUST00000219066 539 ntBASIC14.19□□□□□ -0.14
Gm11127A7VMS2 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm11127A7VMS2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms