Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Shroom2A2ALU4 Gm8410-201ENSMUST00000117225 605 ntBASIC25.08■■□□□ 1.6
Shroom2A2ALU4 Gm18018-201ENSMUST00000198273 408 ntBASIC25.08■■□□□ 1.6
Shroom2A2ALU4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Shroom2A2ALU4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Shroom2A2ALU4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Shroom2A2ALU4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Shroom2A2ALU4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Shroom2A2ALU4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Shroom2A2ALU4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Shroom2A2ALU4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Shroom2A2ALU4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Shroom2A2ALU4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC25.07■■□□□ 1.6
Shroom2A2ALU4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Shroom2A2ALU4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
Shroom2A2ALU4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Shroom2A2ALU4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Shroom2A2ALU4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Shroom2A2ALU4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
Shroom2A2ALU4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Shroom2A2ALU4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Shroom2A2ALU4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
Shroom2A2ALU4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
Shroom2A2ALU4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC25.06■■□□□ 1.6
Shroom2A2ALU4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC25.06■■□□□ 1.6
Shroom2A2ALU4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Shroom2A2ALU4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Shroom2A2ALU4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Shroom2A2ALU4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Shroom2A2ALU4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Shroom2A2ALU4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Shroom2A2ALU4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC25.05■■□□□ 1.6
Shroom2A2ALU4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Shroom2A2ALU4 Gm9908-201ENSMUST00000211534 448 ntBASIC25.05■■□□□ 1.6
Shroom2A2ALU4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC25.05■■□□□ 1.6
Shroom2A2ALU4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Shroom2A2ALU4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Shroom2A2ALU4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Shroom2A2ALU4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Shroom2A2ALU4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Shroom2A2ALU4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Shroom2A2ALU4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Shroom2A2ALU4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Shroom2A2ALU4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Shroom2A2ALU4 Gm11620-201ENSMUST00000118770 1845 ntBASIC25.04■■□□□ 1.6
Shroom2A2ALU4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Shroom2A2ALU4 Gm8131-201ENSMUST00000213783 1570 ntBASIC25.04■■□□□ 1.6
Shroom2A2ALU4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Shroom2A2ALU4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Shroom2A2ALU4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC25.03■■□□□ 1.6
Shroom2A2ALU4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Shroom2A2ALU4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Shroom2A2ALU4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Shroom2A2ALU4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Shroom2A2ALU4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Shroom2A2ALU4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Shroom2A2ALU4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Shroom2A2ALU4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Shroom2A2ALU4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Gm31326-201ENSMUST00000191856 1048 ntBASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Gm18737-201ENSMUST00000173594 937 ntBASIC25.02■■□□□ 1.6
Shroom2A2ALU4 AC166349.1-201ENSMUST00000220866 695 ntBASIC25.02■■□□□ 1.6
Shroom2A2ALU4 AC158538.2-201ENSMUST00000225455 906 ntBASIC25.02■■□□□ 1.6
Shroom2A2ALU4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Gm22189-201ENSMUST00000103822 86 ntBASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom2A2ALU4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Shroom2A2ALU4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Shroom2A2ALU4 Gm9115-201ENSMUST00000120192 1348 ntBASIC25■■□□□ 1.59
Shroom2A2ALU4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC25■■□□□ 1.59
Shroom2A2ALU4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Shroom2A2ALU4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Shroom2A2ALU4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC25■■□□□ 1.59
Shroom2A2ALU4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC25■■□□□ 1.59
Shroom2A2ALU4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 139.8 ms