Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Gm43799-201ENSMUST00000201845 579 ntBASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc112A0AUP1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Gm37722-201ENSMUST00000193757 208 ntBASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc112A0AUP1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Gm27389-201ENSMUST00000183622 195 ntBASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ccdc112A0AUP1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Asic1-205ENSMUST00000228185 1818 ntBASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Gm21559-201ENSMUST00000220638 855 ntBASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Gm8587-201ENSMUST00000076538 843 ntBASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms