Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16■□□□□ 0.15
Gm3854A0A1B0GSS6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Gm3854A0A1B0GSS6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Gm3854A0A1B0GSS6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm3854A0A1B0GSS6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm3854A0A1B0GSS6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm3854A0A1B0GSS6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm3854A0A1B0GSS6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm3854A0A1B0GSS6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Gm3854A0A1B0GSS6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.99■□□□□ 0.15
Gm3854A0A1B0GSS6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm5682-201ENSMUST00000173402 505 ntBASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Mir3113-201ENSMUST00000175478 76 ntBASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm3854A0A1B0GSS6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm11764-201ENSMUST00000120221 623 ntBASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm25911-201ENSMUST00000157621 56 ntBASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms