Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm10052-201ENSMUST00000168019 960 ntBASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm7729-201ENSMUST00000050143 801 ntBASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lnp1A0A1B0GSK3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lnp1A0A1B0GSK3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lnp1A0A1B0GSK3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lnp1A0A1B0GSK3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Gm25016-201ENSMUST00000158399 131 ntBASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.33□□□□□ -0.28
Lnp1A0A1B0GSK3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lnp1A0A1B0GSK3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lnp1A0A1B0GSK3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lnp1A0A1B0GSK3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lnp1A0A1B0GSK3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms