Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Gm7213-201ENSMUST00000215977 950 ntBASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv29A0A0G2LB96 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv29A0A0G2LB96 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv29A0A0G2LB96 Gm10566-201ENSMUST00000086739 996 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms