Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Asic1-205ENSMUST00000228185 1818 ntBASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11355-201ENSMUST00000121120 306 ntBASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44430-201ENSMUST00000203376 995 ntBASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms