Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Mir770-201ENSMUST00000103252 94 ntBASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm37722-201ENSMUST00000193757 208 ntBASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav13n-4A0A0G2JG01 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Otx2os1-206ENSMUST00000228153 787 ntBASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-4A0A0G2JG01 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm27742-201ENSMUST00000184667 60 ntBASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms