Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Phf7-203ENSMUST00000226565 1971 ntBASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm20760-201ENSMUST00000179197 648 ntBASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.04□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms