Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg4a-psA0A0G2JFS9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg4a-psA0A0G2JFS9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Prob1-201ENSMUST00000097619 3021 ntBASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gm15165-201ENSMUST00000118140 502 ntBASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gm12895-201ENSMUST00000122214 226 ntBASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gm18669-201ENSMUST00000216049 778 ntBASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gm6257-201ENSMUST00000163864 910 ntBASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gm28033-201ENSMUST00000184224 96 ntBASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4a-psA0A0G2JFS9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms