Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm18025-201ENSMUST00000221733 862 ntBASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm11249-201ENSMUST00000117071 859 ntBASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm12896-201ENSMUST00000118430 226 ntBASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm18666-201ENSMUST00000190039 958 ntBASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm37179-201ENSMUST00000194862 823 ntBASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm10602-201ENSMUST00000098239 609 ntBASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav3n-3A0A0G2JEM0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms