Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.52□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Gm8495-201ENSMUST00000188740 694 ntBASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Il3ra-202ENSMUST00000223589 738 ntBASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms