Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BC053393A0A0B4J1F6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Il3ra-202ENSMUST00000223589 738 ntBASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Odf3b-204ENSMUST00000227834 930 ntBASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BC053393A0A0B4J1F6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
BC053393A0A0B4J1F6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
BC053393A0A0B4J1F6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
BC053393A0A0B4J1F6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BC053393A0A0B4J1F6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BC053393A0A0B4J1F6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms