Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Mir5133-201ENSMUST00000174955 77 ntBASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv3A0A0A6YYE2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv3A0A0A6YYE2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms