Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Gm18669-201ENSMUST00000216049 778 ntBASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trbc1A0A0A6YWV4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Gm9103-201ENSMUST00000119371 405 ntBASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbc1A0A0A6YWV4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Gm36967-201ENSMUST00000193814 266 ntBASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbc1A0A0A6YWV4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbc1A0A0A6YWV4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbc1A0A0A6YWV4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbc1A0A0A6YWV4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms