Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm7370-201ENSMUST00000219471 767 ntBASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm21559-201ENSMUST00000220638 855 ntBASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm8587-201ENSMUST00000076538 843 ntBASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-7A0A075B6B0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-7A0A075B6B0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6d-7A0A075B6B0 Prob1-201ENSMUST00000097619 3021 ntBASIC12.4□□□□□ -0.43
Trav6d-7A0A075B6B0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6d-7A0A075B6B0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Gm33142-201ENSMUST00000193913 867 ntBASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms