Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm37019-201ENSMUST00000192133 2134 ntBASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 AC159205.3-201ENSMUST00000224614 874 ntBASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm38327-201ENSMUST00000195852 1755 ntBASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Mtag2-201ENSMUST00000058665 714 ntBASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12d-3A0A075B6A4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm11927-201ENSMUST00000118472 759 ntBASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm12134-201ENSMUST00000122109 520 ntBASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm44549-201ENSMUST00000208351 577 ntBASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.98□□□□□ -0.49
Trav12d-3A0A075B6A4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms