Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms