Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Gm11336-201ENSMUST00000118168 334 ntBASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Gm44450-201ENSMUST00000199528 114 ntBASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Slc35b2-202ENSMUST00000223987 1766 ntBASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Gm20472-201ENSMUST00000174403 1240 ntBASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 AC112142.1-201ENSMUST00000228796 918 ntBASIC10.96□□□□□ -0.65
Trav9n-4A0A075B631 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-4A0A075B631 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-4A0A075B631 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-4A0A075B631 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-4A0A075B631 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-4A0A075B631 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-4A0A075B631 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-4A0A075B631 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-4A0A075B631 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trav9n-4A0A075B631 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.66
Trav9n-4A0A075B631 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9n-4A0A075B631 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Trav9n-4A0A075B631 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Gm14464-201ENSMUST00000119658 1254 ntBASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Gm13436-201ENSMUST00000120418 567 ntBASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Gm3272-201ENSMUST00000181181 1229 ntBASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 AL672049.1-201ENSMUST00000197943 91 ntBASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav9n-4A0A075B631 AC159205.3-201ENSMUST00000224614 874 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms