Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Asic1-205ENSMUST00000228185 1818 ntBASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm11539-201ENSMUST00000119837 557 ntBASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm36967-201ENSMUST00000193814 266 ntBASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm44450-201ENSMUST00000199528 114 ntBASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm3375-201ENSMUST00000203929 796 ntBASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm20760-201ENSMUST00000179197 648 ntBASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm18421-201ENSMUST00000204122 625 ntBASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms