Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm10517-202ENSMUST00000192970 758 ntBASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm42642-201ENSMUST00000200683 355 ntBASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16d-dv11A0A075B617 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm2559-201ENSMUST00000201323 363 ntBASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav16d-dv11A0A075B617 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms