Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Gm6345-202ENSMUST00000180900 204 ntBASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.88□□□□□ -0.03
Trav1A0A075B5Z4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav1A0A075B5Z4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav1A0A075B5Z4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav1A0A075B5Z4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms