Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 Y_RNA.114-201ENST00000363265 113 ntBASIC1.12□□□□□ -2.23
SNX9Q9Y5X1 Y_RNA.116-201ENST00000363292 103 ntBASIC1.12□□□□□ -2.23
SNX9Q9Y5X1 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
SNX9Q9Y5X1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.12□□□□□ -2.23
SNX9Q9Y5X1 SNORA25-201ENST00000384384 134 ntBASIC1.12□□□□□ -2.23
SNX9Q9Y5X1 SNORA40-201ENST00000388090 126 ntBASIC1.12□□□□□ -2.23
SNX9Q9Y5X1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SNX9Q9Y5X1 MIR1276-201ENST00000408707 83 ntBASIC1.12□□□□□ -2.23
SNX9Q9Y5X1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.12□□□□□ -2.23
SNX9Q9Y5X1 IGKV1-22-201ENST00000524313 326 ntBASIC1.12□□□□□ -2.23
SNX9Q9Y5X1 U7.2-201ENST00000607576 63 ntBASIC1.12□□□□□ -2.23
SNX9Q9Y5X1 MIR7111-201ENST00000619751 72 ntBASIC1.12□□□□□ -2.23
SNX9Q9Y5X1 AC027335.2-201ENST00000624030 375 ntBASIC1.12□□□□□ -2.23
SNX9Q9Y5X1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.11□□□□□ -2.23
SNX9Q9Y5X1 SNORA1.1-201ENST00000364671 133 ntBASIC1.11□□□□□ -2.23
SNX9Q9Y5X1 RNU4-16P-201ENST00000364737 141 ntBASIC1.11□□□□□ -2.23
SNX9Q9Y5X1 RNU6-580P-201ENST00000365159 107 ntBASIC1.11□□□□□ -2.23
SNX9Q9Y5X1 RNU6-396P-201ENST00000365369 105 ntBASIC1.11□□□□□ -2.23
SNX9Q9Y5X1 Y_RNA.355-201ENST00000365462 98 ntBASIC1.11□□□□□ -2.23
SNX9Q9Y5X1 RNU6-613P-201ENST00000410412 108 ntBASIC1.11□□□□□ -2.23
SNX9Q9Y5X1 RNA5SP144-201ENST00000410846 116 ntBASIC1.11□□□□□ -2.23
SNX9Q9Y5X1 RNU6-240P-201ENST00000516098 97 ntBASIC1.11□□□□□ -2.23
SNX9Q9Y5X1 SNORA70.22-201ENST00000517160 124 ntBASIC1.11□□□□□ -2.23
SNX9Q9Y5X1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.11□□□□□ -2.23
SNX9Q9Y5X1 Y_RNA.757-201ENST00000578934 114 ntBASIC1.11□□□□□ -2.23
SNX9Q9Y5X1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 MIR96-201ENST00000362288 78 ntBASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 Y_RNA.366-201ENST00000365540 102 ntBASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 SNORA22-201ENST00000383907 134 ntBASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 SNORA80D-201ENST00000384488 135 ntBASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 SNORA22C-201ENST00000384614 134 ntBASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 SNORD12C-201ENST00000386307 89 ntBASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 RPS3AP1-201ENST00000413190 320 ntBASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 AL158147.1-201ENST00000443970 75 ntBASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 RNU2-35P-201ENST00000516446 142 ntBASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 MIR2115-201ENST00000516657 100 ntBASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 AC012676.2-201ENST00000619258 186 ntBASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 TUG1_4.1-201ENST00000619464 181 ntBASIC1.1□□□□□ -2.23
SNX9Q9Y5X1 RNU6-690P-201ENST00000365242 106 ntBASIC1.09□□□□□ -2.23
SNX9Q9Y5X1 RNU6-81P-201ENST00000365608 104 ntBASIC1.09□□□□□ -2.23
SNX9Q9Y5X1 SNORD38B-201ENST00000384690 67 ntBASIC1.09□□□□□ -2.23
SNX9Q9Y5X1 MT-TN-201ENST00000387400 73 ntBASIC1.09□□□□□ -2.23
SNX9Q9Y5X1 RNA5SP261-201ENST00000410536 106 ntBASIC1.09□□□□□ -2.23
SNX9Q9Y5X1 Y_RNA.617-201ENST00000410920 90 ntBASIC1.09□□□□□ -2.23
SNX9Q9Y5X1 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
SNX9Q9Y5X1 AC036111.3-201ENST00000526389 112 ntBASIC1.09□□□□□ -2.23
SNX9Q9Y5X1 MIR3152-201ENST00000579801 74 ntBASIC1.09□□□□□ -2.23
SNX9Q9Y5X1 MIR4452-201ENST00000583004 71 ntBASIC1.09□□□□□ -2.23
SNX9Q9Y5X1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.09□□□□□ -2.23
SNX9Q9Y5X1 SNORD38B-202ENST00000625943 69 ntBASIC1.09□□□□□ -2.23
SNX9Q9Y5X1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SNX9Q9Y5X1 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
SNX9Q9Y5X1 SNORA22.1-201ENST00000362701 134 ntBASIC1.08□□□□□ -2.24
SNX9Q9Y5X1 Y_RNA.171-201ENST00000363760 102 ntBASIC1.08□□□□□ -2.24
SNX9Q9Y5X1 SNORD12-201ENST00000391002 90 ntBASIC1.08□□□□□ -2.24
SNX9Q9Y5X1 RNA5SP95-201ENST00000410319 137 ntBASIC1.08□□□□□ -2.24
SNX9Q9Y5X1 AC002429.1-201ENST00000437672 148 ntBASIC1.08□□□□□ -2.24
SNX9Q9Y5X1 RNU6-971P-201ENST00000516920 106 ntBASIC1.08□□□□□ -2.24
SNX9Q9Y5X1 MIR4305-201ENST00000583252 102 ntBASIC1.08□□□□□ -2.24
SNX9Q9Y5X1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
SNX9Q9Y5X1 AL078603.1-201ENST00000603824 313 ntBASIC1.08□□□□□ -2.24
SNX9Q9Y5X1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SNX9Q9Y5X1 MIR377-201ENST00000362145 69 ntBASIC1.07□□□□□ -2.24
SNX9Q9Y5X1 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
SNX9Q9Y5X1 AL512326.2-201ENST00000426359 151 ntBASIC1.07□□□□□ -2.24
SNX9Q9Y5X1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.07□□□□□ -2.24
SNX9Q9Y5X1 RNU5E-3P-201ENST00000515913 68 ntBASIC1.07□□□□□ -2.24
SNX9Q9Y5X1 AC133485.4-201ENST00000561835 220 ntBASIC1.07□□□□□ -2.24
SNX9Q9Y5X1 AC138907.4-201ENST00000570107 226 ntBASIC1.07□□□□□ -2.24
SNX9Q9Y5X1 MIR3910-1-201ENST00000580936 111 ntBASIC1.07□□□□□ -2.24
SNX9Q9Y5X1 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
SNX9Q9Y5X1 AL137067.1-201ENST00000615933 120 ntBASIC1.07□□□□□ -2.24
SNX9Q9Y5X1 MIR6740-201ENST00000618268 113 ntBASIC1.07□□□□□ -2.24
SNX9Q9Y5X1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SNX9Q9Y5X1 SNORD115-2-201ENST00000362842 82 ntBASIC1.06□□□□□ -2.24
SNX9Q9Y5X1 Y_RNA.168-201ENST00000363740 102 ntBASIC1.06□□□□□ -2.24
SNX9Q9Y5X1 SNORD115-20-201ENST00000365099 82 ntBASIC1.06□□□□□ -2.24
SNX9Q9Y5X1 MIR19B1-201ENST00000384829 87 ntBASIC1.06□□□□□ -2.24
SNX9Q9Y5X1 MIR222-201ENST00000384992 110 ntBASIC1.06□□□□□ -2.24
SNX9Q9Y5X1 MIR563-201ENST00000385080 79 ntBASIC1.06□□□□□ -2.24
SNX9Q9Y5X1 snoU13.2-201ENST00000459201 104 ntBASIC1.06□□□□□ -2.24
SNX9Q9Y5X1 snoU13.18-201ENST00000459483 104 ntBASIC1.06□□□□□ -2.24
SNX9Q9Y5X1 RNU7-123P-201ENST00000515911 60 ntBASIC1.06□□□□□ -2.24
SNX9Q9Y5X1 RN7SKP19-201ENST00000516016 252 ntBASIC1.06□□□□□ -2.24
SNX9Q9Y5X1 MIR4264-201ENST00000583520 66 ntBASIC1.06□□□□□ -2.24
SNX9Q9Y5X1 AC021443.1-201ENST00000604478 211 ntBASIC1.06□□□□□ -2.24
SNX9Q9Y5X1 uc_338.6-201ENST00000613544 171 ntBASIC1.06□□□□□ -2.24
SNX9Q9Y5X1 AC008163.1-202ENST00000636004 2889 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 RNU6-235P-201ENST00000362644 107 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 Y_RNA.218-201ENST00000364218 104 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 Y_RNA.298-201ENST00000364960 107 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 Y_RNA.470-201ENST00000384307 117 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 RNU6-1104P-201ENST00000384723 104 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 MIRLET7F2-201ENST00000385277 83 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 RNU6-205P-201ENST00000390858 107 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 RNU7-90P-201ENST00000459216 62 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 UBL5P1-201ENST00000507979 193 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 250 ms