Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RNU7-95P-201ENST00000459222 64 ntBASIC1.37□□□□□ -2.19
PCDHA3Q9Y5H8 AC113410.1-201ENST00000505029 247 ntBASIC1.37□□□□□ -2.19
PCDHA3Q9Y5H8 RNU6-1053P-201ENST00000515930 101 ntBASIC1.37□□□□□ -2.19
PCDHA3Q9Y5H8 Y_RNA.168-201ENST00000363740 102 ntBASIC1.36□□□□□ -2.19
PCDHA3Q9Y5H8 Y_RNA.218-201ENST00000364218 104 ntBASIC1.36□□□□□ -2.19
PCDHA3Q9Y5H8 RNU6-654P-201ENST00000364373 107 ntBASIC1.36□□□□□ -2.19
PCDHA3Q9Y5H8 Y_RNA.531-201ENST00000384589 121 ntBASIC1.36□□□□□ -2.19
PCDHA3Q9Y5H8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
PCDHA3Q9Y5H8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.36□□□□□ -2.19
PCDHA3Q9Y5H8 snoU13.2-201ENST00000459201 104 ntBASIC1.36□□□□□ -2.19
PCDHA3Q9Y5H8 RNU7-90P-201ENST00000459216 62 ntBASIC1.36□□□□□ -2.19
PCDHA3Q9Y5H8 RNU7-113P-201ENST00000459273 62 ntBASIC1.36□□□□□ -2.19
PCDHA3Q9Y5H8 RNU7-123P-201ENST00000515911 60 ntBASIC1.36□□□□□ -2.19
PCDHA3Q9Y5H8 AC004812.1-201ENST00000540773 146 ntBASIC1.36□□□□□ -2.19
PCDHA3Q9Y5H8 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
PCDHA3Q9Y5H8 Y_RNA.171-201ENST00000363760 102 ntBASIC1.35□□□□□ -2.19
PCDHA3Q9Y5H8 MIRLET7F2-201ENST00000385277 83 ntBASIC1.35□□□□□ -2.19
PCDHA3Q9Y5H8 SNORD12C-201ENST00000386307 89 ntBASIC1.35□□□□□ -2.19
PCDHA3Q9Y5H8 MRPL35P3-201ENST00000421557 364 ntBASIC1.35□□□□□ -2.19
PCDHA3Q9Y5H8 AL512326.2-201ENST00000426359 151 ntBASIC1.35□□□□□ -2.19
PCDHA3Q9Y5H8 RN7SKP179-201ENST00000516126 217 ntBASIC1.35□□□□□ -2.19
PCDHA3Q9Y5H8 RNY4P20-201ENST00000516678 93 ntBASIC1.35□□□□□ -2.19
PCDHA3Q9Y5H8 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.35□□□□□ -2.19
PCDHA3Q9Y5H8 AC027335.2-201ENST00000624030 375 ntBASIC1.35□□□□□ -2.19
PCDHA3Q9Y5H8 SNORD113.3-201ENST00000364630 78 ntBASIC1.34□□□□□ -2.19
PCDHA3Q9Y5H8 SNORD58C-201ENST00000365223 64 ntBASIC1.34□□□□□ -2.19
PCDHA3Q9Y5H8 Y_RNA.330-201ENST00000365230 109 ntBASIC1.34□□□□□ -2.19
PCDHA3Q9Y5H8 SNORD116-14-201ENST00000383894 92 ntBASIC1.34□□□□□ -2.19
PCDHA3Q9Y5H8 SNORD116-17-201ENST00000383929 92 ntBASIC1.34□□□□□ -2.19
PCDHA3Q9Y5H8 SNORD116-15-201ENST00000384445 92 ntBASIC1.34□□□□□ -2.19
PCDHA3Q9Y5H8 SNORD116-19-201ENST00000384729 92 ntBASIC1.34□□□□□ -2.19
PCDHA3Q9Y5H8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
PCDHA3Q9Y5H8 AC004223.1-201ENST00000479840 271 ntBASIC1.34□□□□□ -2.19
PCDHA3Q9Y5H8 RNU6-1234P-201ENST00000516877 103 ntBASIC1.34□□□□□ -2.19
PCDHA3Q9Y5H8 Y_RNA.712-201ENST00000517011 92 ntBASIC1.34□□□□□ -2.19
PCDHA3Q9Y5H8 AC036111.3-201ENST00000526389 112 ntBASIC1.34□□□□□ -2.19
PCDHA3Q9Y5H8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
PCDHA3Q9Y5H8 Y_RNA.299-201ENST00000364973 94 ntBASIC1.33□□□□□ -2.2
PCDHA3Q9Y5H8 RNU6-1117P-201ENST00000384525 104 ntBASIC1.33□□□□□ -2.2
PCDHA3Q9Y5H8 MIR563-201ENST00000385080 79 ntBASIC1.33□□□□□ -2.2
PCDHA3Q9Y5H8 SNORD111-201ENST00000408139 94 ntBASIC1.33□□□□□ -2.2
PCDHA3Q9Y5H8 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
PCDHA3Q9Y5H8 RNU6-781P-201ENST00000516377 101 ntBASIC1.33□□□□□ -2.2
PCDHA3Q9Y5H8 RNU6-659P-201ENST00000516454 104 ntBASIC1.33□□□□□ -2.2
PCDHA3Q9Y5H8 AC106800.4-201ENST00000614905 153 ntBASIC1.33□□□□□ -2.2
PCDHA3Q9Y5H8 AC008163.1-202ENST00000636004 2889 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 Y_RNA.127-201ENST00000363386 109 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 SNORA7.1-201ENST00000363750 139 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 Y_RNA.470-201ENST00000384307 117 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 MIR588-201ENST00000384900 83 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 MIR222-201ENST00000384992 110 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 RNU6-205P-201ENST00000390858 107 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 AC008267.6-201ENST00000441664 139 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 RNU7-107P-201ENST00000459121 61 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 COX6CP6-201ENST00000490840 228 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 RNU6-772P-201ENST00000516042 105 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 MIR4421-201ENST00000578133 69 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 MIR6740-201ENST00000618268 113 ntBASIC1.32□□□□□ -2.2
PCDHA3Q9Y5H8 MIR19B1-201ENST00000384829 87 ntBASIC1.31□□□□□ -2.2
PCDHA3Q9Y5H8 MIR1263-201ENST00000408324 86 ntBASIC1.31□□□□□ -2.2
PCDHA3Q9Y5H8 RNA5SP95-201ENST00000410319 137 ntBASIC1.31□□□□□ -2.2
PCDHA3Q9Y5H8 AC063976.4-201ENST00000421971 163 ntBASIC1.31□□□□□ -2.2
PCDHA3Q9Y5H8 RNU7-62P-201ENST00000458856 62 ntBASIC1.31□□□□□ -2.2
PCDHA3Q9Y5H8 Y_RNA.676-201ENST00000516393 96 ntBASIC1.31□□□□□ -2.2
PCDHA3Q9Y5H8 RNU6-1061P-201ENST00000516530 99 ntBASIC1.31□□□□□ -2.2
PCDHA3Q9Y5H8 RNA5SP33-201ENST00000516687 98 ntBASIC1.31□□□□□ -2.2
PCDHA3Q9Y5H8 AL359821.1-201ENST00000605519 182 ntBASIC1.31□□□□□ -2.2
PCDHA3Q9Y5H8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
PCDHA3Q9Y5H8 MIR337-201ENST00000362281 93 ntBASIC1.3□□□□□ -2.2
PCDHA3Q9Y5H8 Y_RNA.198-201ENST00000364013 98 ntBASIC1.3□□□□□ -2.2
PCDHA3Q9Y5H8 Y_RNA.346-201ENST00000365385 112 ntBASIC1.3□□□□□ -2.2
PCDHA3Q9Y5H8 SNORA2B-201ENST00000384583 137 ntBASIC1.3□□□□□ -2.2
PCDHA3Q9Y5H8 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
PCDHA3Q9Y5H8 RPS23P4-201ENST00000487908 423 ntBASIC1.3□□□□□ -2.2
PCDHA3Q9Y5H8 RNU6-62P-201ENST00000516526 102 ntBASIC1.3□□□□□ -2.2
PCDHA3Q9Y5H8 AC019288.1-201ENST00000557918 224 ntBASIC1.3□□□□□ -2.2
PCDHA3Q9Y5H8 AC025166.1-201ENST00000612411 163 ntBASIC1.3□□□□□ -2.2
PCDHA3Q9Y5H8 AC012676.2-201ENST00000619258 186 ntBASIC1.3□□□□□ -2.2
PCDHA3Q9Y5H8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
PCDHA3Q9Y5H8 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
PCDHA3Q9Y5H8 RNU6-22P-201ENST00000384355 107 ntBASIC1.29□□□□□ -2.2
PCDHA3Q9Y5H8 SNORA18-201ENST00000384416 132 ntBASIC1.29□□□□□ -2.2
PCDHA3Q9Y5H8 Y_RNA.528-201ENST00000384575 108 ntBASIC1.29□□□□□ -2.2
PCDHA3Q9Y5H8 RNU6-1104P-201ENST00000384723 104 ntBASIC1.29□□□□□ -2.2
PCDHA3Q9Y5H8 RNU6-321P-201ENST00000410912 106 ntBASIC1.29□□□□□ -2.2
PCDHA3Q9Y5H8 RNU6-1086P-201ENST00000410930 100 ntBASIC1.29□□□□□ -2.2
PCDHA3Q9Y5H8 TRMT112P2-201ENST00000512910 132 ntBASIC1.29□□□□□ -2.2
PCDHA3Q9Y5H8 AL157834.3-201ENST00000615543 103 ntBASIC1.29□□□□□ -2.2
PCDHA3Q9Y5H8 MIR3914-2-201ENST00000637339 95 ntBASIC1.29□□□□□ -2.2
PCDHA3Q9Y5H8 AL157777.2-201ENST00000258070 137 ntBASIC1.28□□□□□ -2.2
PCDHA3Q9Y5H8 Y_RNA.4-201ENST00000362333 112 ntBASIC1.28□□□□□ -2.2
PCDHA3Q9Y5H8 RNY1P10-201ENST00000363268 113 ntBASIC1.28□□□□□ -2.2
PCDHA3Q9Y5H8 Y_RNA.164-201ENST00000363709 102 ntBASIC1.28□□□□□ -2.2
PCDHA3Q9Y5H8 RNU1-124P-201ENST00000363861 145 ntBASIC1.28□□□□□ -2.2
PCDHA3Q9Y5H8 SNORA25.8-201ENST00000364831 128 ntBASIC1.28□□□□□ -2.2
PCDHA3Q9Y5H8 Y_RNA.563-201ENST00000384707 108 ntBASIC1.28□□□□□ -2.2
PCDHA3Q9Y5H8 RNU6-1165P-201ENST00000410119 107 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms