Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 Y_RNA.261-201ENST00000364631 102 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 Y_RNA.291-201ENST00000364886 113 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 Y_RNA.346-201ENST00000365385 112 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 Y_RNA.354-201ENST00000365448 111 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 SNORA22C-201ENST00000384614 134 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 RNA5SP144-201ENST00000410846 116 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 AL022718.1-201ENST00000412004 84 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 RPS3AP1-201ENST00000413190 320 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 RPS27P16-201ENST00000425758 201 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 RNU7-164P-201ENST00000459221 62 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 RNU7-45P-201ENST00000459460 63 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 RNA5SP220-201ENST00000516298 104 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 IGKV1-22-201ENST00000524313 326 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 MIR548AO-201ENST00000579992 96 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 AL359881.1-201ENST00000602916 267 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 MIR6734-201ENST00000621166 68 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 Z97988.1-201ENST00000637697 135 ntBASIC1.48□□□□□ -2.17
SSX2IPQ9Y2D8 RNA5SP205-201ENST00000364653 136 ntBASIC1.47□□□□□ -2.17
SSX2IPQ9Y2D8 Y_RNA.540-201ENST00000384638 111 ntBASIC1.47□□□□□ -2.17
SSX2IPQ9Y2D8 RNU1-123P-201ENST00000458950 160 ntBASIC1.47□□□□□ -2.17
SSX2IPQ9Y2D8 RNU6-781P-201ENST00000516377 101 ntBASIC1.47□□□□□ -2.17
SSX2IPQ9Y2D8 AC025166.1-201ENST00000612411 163 ntBASIC1.47□□□□□ -2.17
SSX2IPQ9Y2D8 U6.95-201ENST00000636931 70 ntBASIC1.47□□□□□ -2.17
SSX2IPQ9Y2D8 MIR3914-2-201ENST00000637339 95 ntBASIC1.47□□□□□ -2.17
SSX2IPQ9Y2D8 MIR26B-201ENST00000362251 77 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 SNORA22.1-201ENST00000362701 134 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 Y_RNA.298-201ENST00000364960 107 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 Y_RNA.563-201ENST00000384707 108 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 MIRLET7F2-201ENST00000385277 83 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 MIR1263-201ENST00000408324 86 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 RNU6-1190P-201ENST00000410811 104 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 POLR2J4-204ENST00000418424 324 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 RNA5SP480-201ENST00000516840 109 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 RN7SKP88-201ENST00000516847 250 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 RNA5SP102-201ENST00000516865 106 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 RNU6-165P-201ENST00000517170 99 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 CYP3A52P-201ENST00000563326 91 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 7SK.8-201ENST00000612110 250 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 7SK.11-201ENST00000615477 250 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 RMST_2.1-201ENST00000617263 136 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 7SK.13-201ENST00000622040 250 ntBASIC1.46□□□□□ -2.18
SSX2IPQ9Y2D8 MIR759-201ENST00000390224 91 ntBASIC1.45□□□□□ -2.18
SSX2IPQ9Y2D8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.45□□□□□ -2.18
SSX2IPQ9Y2D8 HMGN1P33-201ENST00000432945 451 ntBASIC1.45□□□□□ -2.18
SSX2IPQ9Y2D8 RNY4P20-201ENST00000516678 93 ntBASIC1.45□□□□□ -2.18
SSX2IPQ9Y2D8 RNU11-2P-201ENST00000516898 142 ntBASIC1.45□□□□□ -2.18
SSX2IPQ9Y2D8 MIR6841-201ENST00000637129 72 ntBASIC1.45□□□□□ -2.18
SSX2IPQ9Y2D8 Y_RNA.525-201ENST00000384570 113 ntBASIC1.44□□□□□ -2.18
SSX2IPQ9Y2D8 Y_RNA.528-201ENST00000384575 108 ntBASIC1.44□□□□□ -2.18
SSX2IPQ9Y2D8 SNORD38B-201ENST00000384690 67 ntBASIC1.44□□□□□ -2.18
SSX2IPQ9Y2D8 RNU6-1054P-201ENST00000411293 104 ntBASIC1.44□□□□□ -2.18
SSX2IPQ9Y2D8 AC245047.7-201ENST00000440265 293 ntBASIC1.44□□□□□ -2.18
SSX2IPQ9Y2D8 COX6CP6-201ENST00000490840 228 ntBASIC1.44□□□□□ -2.18
SSX2IPQ9Y2D8 RNU2-35P-201ENST00000516446 142 ntBASIC1.44□□□□□ -2.18
SSX2IPQ9Y2D8 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.44□□□□□ -2.18
SSX2IPQ9Y2D8 SNORD38B-202ENST00000625943 69 ntBASIC1.44□□□□□ -2.18
SSX2IPQ9Y2D8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SSX2IPQ9Y2D8 RNA5SP264-201ENST00000363115 107 ntBASIC1.43□□□□□ -2.18
SSX2IPQ9Y2D8 SNORA25.3-201ENST00000363205 127 ntBASIC1.43□□□□□ -2.18
SSX2IPQ9Y2D8 RNU6-396P-201ENST00000365369 105 ntBASIC1.43□□□□□ -2.18
SSX2IPQ9Y2D8 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
SSX2IPQ9Y2D8 snoU13.25-201ENST00000458945 104 ntBASIC1.43□□□□□ -2.18
SSX2IPQ9Y2D8 RNU7-113P-201ENST00000459273 62 ntBASIC1.43□□□□□ -2.18
SSX2IPQ9Y2D8 RNU7-123P-201ENST00000515911 60 ntBASIC1.43□□□□□ -2.18
SSX2IPQ9Y2D8 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
SSX2IPQ9Y2D8 AP003716.2-201ENST00000528260 108 ntBASIC1.43□□□□□ -2.18
SSX2IPQ9Y2D8 MTND5P18-201ENST00000445624 1801 ntBASIC1.43□□□□□ -2.18
SSX2IPQ9Y2D8 RNU6-834P-201ENST00000362367 110 ntBASIC1.42□□□□□ -2.18
SSX2IPQ9Y2D8 Y_RNA.198-201ENST00000364013 98 ntBASIC1.42□□□□□ -2.18
SSX2IPQ9Y2D8 Y_RNA.299-201ENST00000364973 94 ntBASIC1.42□□□□□ -2.18
SSX2IPQ9Y2D8 Y_RNA.531-201ENST00000384589 121 ntBASIC1.42□□□□□ -2.18
SSX2IPQ9Y2D8 RNU6-602P-201ENST00000411155 105 ntBASIC1.42□□□□□ -2.18
SSX2IPQ9Y2D8 Y_RNA.630-201ENST00000411370 108 ntBASIC1.42□□□□□ -2.18
SSX2IPQ9Y2D8 MIR2115-201ENST00000516657 100 ntBASIC1.42□□□□□ -2.18
SSX2IPQ9Y2D8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.42□□□□□ -2.18
SSX2IPQ9Y2D8 AC004812.1-201ENST00000540773 146 ntBASIC1.42□□□□□ -2.18
SSX2IPQ9Y2D8 PRELID3BP2-201ENST00000605362 201 ntBASIC1.42□□□□□ -2.18
SSX2IPQ9Y2D8 MIR103A2-201ENST00000362154 78 ntBASIC1.41□□□□□ -2.18
SSX2IPQ9Y2D8 SNORD115-2-201ENST00000362842 82 ntBASIC1.41□□□□□ -2.18
SSX2IPQ9Y2D8 Y_RNA.213-201ENST00000364178 111 ntBASIC1.41□□□□□ -2.18
SSX2IPQ9Y2D8 SNORD115-20-201ENST00000365099 82 ntBASIC1.41□□□□□ -2.18
SSX2IPQ9Y2D8 SNORD114-22-201ENST00000365423 72 ntBASIC1.41□□□□□ -2.18
SSX2IPQ9Y2D8 SNORA40.6-201ENST00000391153 128 ntBASIC1.41□□□□□ -2.18
SSX2IPQ9Y2D8 MIR1302-7-201ENST00000408841 72 ntBASIC1.41□□□□□ -2.18
SSX2IPQ9Y2D8 AC113410.1-201ENST00000505029 247 ntBASIC1.41□□□□□ -2.18
SSX2IPQ9Y2D8 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
SSX2IPQ9Y2D8 MIR8065-201ENST00000620577 100 ntBASIC1.41□□□□□ -2.18
SSX2IPQ9Y2D8 AC090844.1-201ENST00000422019 156 ntBASIC1.4□□□□□ -2.19
SSX2IPQ9Y2D8 AL512326.2-201ENST00000426359 151 ntBASIC1.4□□□□□ -2.19
SSX2IPQ9Y2D8 Y_RNA.171-201ENST00000363760 102 ntBASIC1.39□□□□□ -2.19
SSX2IPQ9Y2D8 Y_RNA.273-201ENST00000364703 102 ntBASIC1.39□□□□□ -2.19
SSX2IPQ9Y2D8 Y_RNA.353-201ENST00000365440 108 ntBASIC1.39□□□□□ -2.19
SSX2IPQ9Y2D8 RNU6-939P-201ENST00000384634 107 ntBASIC1.39□□□□□ -2.19
SSX2IPQ9Y2D8 MIR1185-1-201ENST00000408598 86 ntBASIC1.39□□□□□ -2.19
SSX2IPQ9Y2D8 Y_RNA.629-201ENST00000411368 105 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms