Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 MRPS18CP4-201ENST00000535821 231 ntBASIC0.57□□□□□ -2.32
NCKAP1Q9Y2A7 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
NCKAP1Q9Y2A7 MIR6841-201ENST00000637129 72 ntBASIC0.57□□□□□ -2.32
NCKAP1Q9Y2A7 RNU6-275P-201ENST00000364910 107 ntBASIC0.56□□□□□ -2.32
NCKAP1Q9Y2A7 RNU6-597P-201ENST00000365620 102 ntBASIC0.56□□□□□ -2.32
NCKAP1Q9Y2A7 RNY1P8-201ENST00000383970 114 ntBASIC0.56□□□□□ -2.32
NCKAP1Q9Y2A7 RNU6-643P-201ENST00000384018 107 ntBASIC0.56□□□□□ -2.32
NCKAP1Q9Y2A7 MIR125B2-201ENST00000385128 89 ntBASIC0.56□□□□□ -2.32
NCKAP1Q9Y2A7 MIR624-201ENST00000385217 97 ntBASIC0.56□□□□□ -2.32
NCKAP1Q9Y2A7 RNU6-918P-201ENST00000391219 106 ntBASIC0.56□□□□□ -2.32
NCKAP1Q9Y2A7 RNU7-185P-201ENST00000459215 60 ntBASIC0.56□□□□□ -2.32
NCKAP1Q9Y2A7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.56□□□□□ -2.32
NCKAP1Q9Y2A7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 MIR302B-201ENST00000362188 73 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 Y_RNA.75-201ENST00000362927 97 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 Y_RNA.307-201ENST00000365022 117 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 Y_RNA.412-201ENST00000384001 104 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 Y_RNA.452-201ENST00000384202 108 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 Y_RNA.454-201ENST00000384224 113 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 RNU6-574P-201ENST00000384265 107 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 MT-TF-201ENST00000387314 71 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 RNA5SP127-201ENST00000411051 133 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 SEPT7P4-201ENST00000437076 306 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 MIR4711-201ENST00000578274 70 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 AC008608.1-201ENST00000603910 127 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 MIR6779-201ENST00000617283 64 ntBASIC0.55□□□□□ -2.32
NCKAP1Q9Y2A7 AL596211.1-201ENST00000569873 2277 ntBASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 Y_RNA.182-201ENST00000363880 111 ntBASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 Y_RNA.205-201ENST00000364128 113 ntBASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 RNU6-702P-201ENST00000364982 107 ntBASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 Y_RNA.435-201ENST00000384095 112 ntBASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 RNU6-196P-201ENST00000384315 107 ntBASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 MIR938-201ENST00000401216 83 ntBASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 RNA5SP261-201ENST00000410536 106 ntBASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 RNA5SP222-201ENST00000411039 105 ntBASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 SNORD92-201ENST00000585078 85 ntBASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 U6.106-201ENST00000636360 105 ntBASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 AC010487.4-201ENST00000637027 61 ntBASIC0.54□□□□□ -2.32
NCKAP1Q9Y2A7 AL589743.1-201ENST00000551932 2712 ntBASIC0.53□□□□□ -2.32
NCKAP1Q9Y2A7 MIR18A-201ENST00000362310 71 ntBASIC0.53□□□□□ -2.32
NCKAP1Q9Y2A7 RNU4-70P-201ENST00000384579 139 ntBASIC0.53□□□□□ -2.32
NCKAP1Q9Y2A7 MIR193B-201ENST00000384907 83 ntBASIC0.53□□□□□ -2.32
NCKAP1Q9Y2A7 AC098934.3-201ENST00000430450 190 ntBASIC0.53□□□□□ -2.32
NCKAP1Q9Y2A7 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
NCKAP1Q9Y2A7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.53□□□□□ -2.32
NCKAP1Q9Y2A7 MIR3612-201ENST00000579753 87 ntBASIC0.53□□□□□ -2.32
NCKAP1Q9Y2A7 AC090897.1-201ENST00000580909 226 ntBASIC0.53□□□□□ -2.32
NCKAP1Q9Y2A7 MIR3149-201ENST00000584629 83 ntBASIC0.53□□□□□ -2.32
NCKAP1Q9Y2A7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
NCKAP1Q9Y2A7 SNORD18A-201ENST00000363753 72 ntBASIC0.52□□□□□ -2.33
NCKAP1Q9Y2A7 SNORA20.1-201ENST00000364790 130 ntBASIC0.52□□□□□ -2.33
NCKAP1Q9Y2A7 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
NCKAP1Q9Y2A7 RNU7-102P-201ENST00000458948 62 ntBASIC0.52□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-1149P-201ENST00000516810 97 ntBASIC0.52□□□□□ -2.33
NCKAP1Q9Y2A7 AC018659.1-201ENST00000551083 169 ntBASIC0.52□□□□□ -2.33
NCKAP1Q9Y2A7 AL353621.2-201ENST00000605340 133 ntBASIC0.52□□□□□ -2.33
NCKAP1Q9Y2A7 AL662814.1-201ENST00000617364 121 ntBASIC0.52□□□□□ -2.33
NCKAP1Q9Y2A7 AC021613.1-201ENST00000623880 111 ntBASIC0.52□□□□□ -2.33
NCKAP1Q9Y2A7 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-47P-201ENST00000383866 107 ntBASIC0.51□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-463P-201ENST00000384340 107 ntBASIC0.51□□□□□ -2.33
NCKAP1Q9Y2A7 MIR1257-201ENST00000408490 117 ntBASIC0.51□□□□□ -2.33
NCKAP1Q9Y2A7 SNORD100-201ENST00000408573 76 ntBASIC0.51□□□□□ -2.33
NCKAP1Q9Y2A7 RNA5SP193-201ENST00000410353 107 ntBASIC0.51□□□□□ -2.33
NCKAP1Q9Y2A7 AC096949.1-201ENST00000412047 152 ntBASIC0.51□□□□□ -2.33
NCKAP1Q9Y2A7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.51□□□□□ -2.33
NCKAP1Q9Y2A7 MIR3152-201ENST00000579801 74 ntBASIC0.51□□□□□ -2.33
NCKAP1Q9Y2A7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.51□□□□□ -2.33
NCKAP1Q9Y2A7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.5□□□□□ -2.33
NCKAP1Q9Y2A7 MIR411-201ENST00000362239 96 ntBASIC0.5□□□□□ -2.33
NCKAP1Q9Y2A7 SNORA36.2-201ENST00000384004 127 ntBASIC0.5□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.5□□□□□ -2.33
NCKAP1Q9Y2A7 MIR140-201ENST00000385282 100 ntBASIC0.5□□□□□ -2.33
NCKAP1Q9Y2A7 RNU7-156P-201ENST00000517214 74 ntBASIC0.5□□□□□ -2.33
NCKAP1Q9Y2A7 MIR1273G-201ENST00000577677 100 ntBASIC0.5□□□□□ -2.33
NCKAP1Q9Y2A7 MIR4431-201ENST00000579990 94 ntBASIC0.5□□□□□ -2.33
NCKAP1Q9Y2A7 AC009779.6-201ENST00000603972 165 ntBASIC0.5□□□□□ -2.33
NCKAP1Q9Y2A7 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.5□□□□□ -2.33
NCKAP1Q9Y2A7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
NCKAP1Q9Y2A7 SNORA22.1-201ENST00000362701 134 ntBASIC0.49□□□□□ -2.33
NCKAP1Q9Y2A7 Y_RNA.200-201ENST00000364018 102 ntBASIC0.49□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-1336P-201ENST00000383886 109 ntBASIC0.49□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-447P-201ENST00000410293 104 ntBASIC0.49□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-1118P-201ENST00000410382 104 ntBASIC0.49□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-1076P-201ENST00000410397 104 ntBASIC0.49□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-355P-201ENST00000410427 104 ntBASIC0.49□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-791P-201ENST00000410467 104 ntBASIC0.49□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-705P-201ENST00000410601 104 ntBASIC0.49□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-1100P-201ENST00000410691 104 ntBASIC0.49□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-860P-201ENST00000410860 104 ntBASIC0.49□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-1217P-201ENST00000411276 104 ntBASIC0.49□□□□□ -2.33
NCKAP1Q9Y2A7 RNU6-785P-201ENST00000411324 104 ntBASIC0.49□□□□□ -2.33
NCKAP1Q9Y2A7 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms