Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC055731.1-201ENST00000474387 401 ntBASIC2.92□□□□□ -1.94
ZC3H4Q9UPT8 SNORD67.1-201ENST00000516618 108 ntBASIC2.92□□□□□ -1.94
ZC3H4Q9UPT8 SNORA31.15-201ENST00000516771 132 ntBASIC2.92□□□□□ -1.94
ZC3H4Q9UPT8 MIR5588-201ENST00000581890 63 ntBASIC2.92□□□□□ -1.94
ZC3H4Q9UPT8 AC046143.2-201ENST00000609789 160 ntBASIC2.92□□□□□ -1.94
ZC3H4Q9UPT8 RNU6-1237P-201ENST00000384777 107 ntBASIC2.91□□□□□ -1.94
ZC3H4Q9UPT8 MIR34C-201ENST00000384831 77 ntBASIC2.91□□□□□ -1.94
ZC3H4Q9UPT8 RNU6-1307P-201ENST00000391012 103 ntBASIC2.91□□□□□ -1.94
ZC3H4Q9UPT8 RNU7-43P-201ENST00000516554 64 ntBASIC2.91□□□□□ -1.94
ZC3H4Q9UPT8 MIR4764-201ENST00000580680 88 ntBASIC2.91□□□□□ -1.94
ZC3H4Q9UPT8 AC105081.1-201ENST00000617727 106 ntBASIC2.91□□□□□ -1.94
ZC3H4Q9UPT8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.9□□□□□ -1.95
ZC3H4Q9UPT8 SNORD38.1-201ENST00000363863 68 ntBASIC2.9□□□□□ -1.95
ZC3H4Q9UPT8 MIR520C-201ENST00000385005 87 ntBASIC2.9□□□□□ -1.95
ZC3H4Q9UPT8 RNU6-295P-201ENST00000516901 104 ntBASIC2.9□□□□□ -1.95
ZC3H4Q9UPT8 RNU7-35P-201ENST00000517174 62 ntBASIC2.9□□□□□ -1.95
ZC3H4Q9UPT8 MIR5007-201ENST00000583098 95 ntBASIC2.9□□□□□ -1.95
ZC3H4Q9UPT8 MIR5092-201ENST00000583139 88 ntBASIC2.9□□□□□ -1.95
ZC3H4Q9UPT8 MIR8055-201ENST00000610739 97 ntBASIC2.9□□□□□ -1.95
ZC3H4Q9UPT8 MIR8065-201ENST00000620577 100 ntBASIC2.9□□□□□ -1.95
ZC3H4Q9UPT8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ZC3H4Q9UPT8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ZC3H4Q9UPT8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ZC3H4Q9UPT8 AC005336.3-201ENST00000623833 2679 ntBASIC2.89□□□□□ -1.95
ZC3H4Q9UPT8 ZNF355P-201ENST00000427301 3216 ntBASIC2.89□□□□□ -1.95
ZC3H4Q9UPT8 RNU6-219P-201ENST00000364728 107 ntBASIC2.89□□□□□ -1.95
ZC3H4Q9UPT8 SNORD58A-201ENST00000383875 65 ntBASIC2.89□□□□□ -1.95
ZC3H4Q9UPT8 Y_RNA.437-201ENST00000384113 113 ntBASIC2.89□□□□□ -1.95
ZC3H4Q9UPT8 Y_RNA.508-201ENST00000384502 114 ntBASIC2.89□□□□□ -1.95
ZC3H4Q9UPT8 U8.13-201ENST00000390842 128 ntBASIC2.89□□□□□ -1.95
ZC3H4Q9UPT8 AC121758.2-201ENST00000553271 193 ntBASIC2.89□□□□□ -1.95
ZC3H4Q9UPT8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ZC3H4Q9UPT8 Y_RNA.140-201ENST00000363474 103 ntBASIC2.88□□□□□ -1.95
ZC3H4Q9UPT8 Y_RNA.611-201ENST00000410682 108 ntBASIC2.88□□□□□ -1.95
ZC3H4Q9UPT8 RNU6-917P-201ENST00000516294 104 ntBASIC2.88□□□□□ -1.95
ZC3H4Q9UPT8 MIR6895-201ENST00000613497 78 ntBASIC2.88□□□□□ -1.95
ZC3H4Q9UPT8 MIR219B-201ENST00000637023 88 ntBASIC2.88□□□□□ -1.95
ZC3H4Q9UPT8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.87□□□□□ -1.95
ZC3H4Q9UPT8 RNU6-979P-201ENST00000383896 107 ntBASIC2.87□□□□□ -1.95
ZC3H4Q9UPT8 Y_RNA.620-201ENST00000411009 88 ntBASIC2.87□□□□□ -1.95
ZC3H4Q9UPT8 RNU6-602P-201ENST00000411155 105 ntBASIC2.87□□□□□ -1.95
ZC3H4Q9UPT8 RPL31P63-201ENST00000422565 375 ntBASIC2.87□□□□□ -1.95
ZC3H4Q9UPT8 SPINT5P-201ENST00000448174 155 ntBASIC2.87□□□□□ -1.95
ZC3H4Q9UPT8 RNU7-79P-201ENST00000516082 62 ntBASIC2.87□□□□□ -1.95
ZC3H4Q9UPT8 SNORA31.17-201ENST00000516953 127 ntBASIC2.87□□□□□ -1.95
ZC3H4Q9UPT8 MIR5694-201ENST00000581190 76 ntBASIC2.87□□□□□ -1.95
ZC3H4Q9UPT8 SEPT14P17-201ENST00000617978 177 ntBASIC2.87□□□□□ -1.95
ZC3H4Q9UPT8 Z97988.1-201ENST00000637697 135 ntBASIC2.87□□□□□ -1.95
ZC3H4Q9UPT8 MIR6073-201ENST00000352083 89 ntBASIC2.86□□□□□ -1.95
ZC3H4Q9UPT8 RNU6-1125P-201ENST00000363601 107 ntBASIC2.86□□□□□ -1.95
ZC3H4Q9UPT8 Y_RNA.191-201ENST00000363972 113 ntBASIC2.86□□□□□ -1.95
ZC3H4Q9UPT8 RNU6-1163P-201ENST00000364516 107 ntBASIC2.86□□□□□ -1.95
ZC3H4Q9UPT8 DEFA7P-201ENST00000382676 285 ntBASIC2.86□□□□□ -1.95
ZC3H4Q9UPT8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.86□□□□□ -1.95
ZC3H4Q9UPT8 AL445685.2-201ENST00000422551 342 ntBASIC2.86□□□□□ -1.95
ZC3H4Q9UPT8 AC026436.1-201ENST00000510537 270 ntBASIC2.86□□□□□ -1.95
ZC3H4Q9UPT8 RNU6-1006P-201ENST00000516998 103 ntBASIC2.86□□□□□ -1.95
ZC3H4Q9UPT8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.86□□□□□ -1.95
ZC3H4Q9UPT8 MIR4781-201ENST00000585250 76 ntBASIC2.86□□□□□ -1.95
ZC3H4Q9UPT8 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.86□□□□□ -1.95
ZC3H4Q9UPT8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ZC3H4Q9UPT8 RNA5SP100-201ENST00000410903 110 ntBASIC2.85□□□□□ -1.95
ZC3H4Q9UPT8 RNA5SP59-201ENST00000410922 110 ntBASIC2.85□□□□□ -1.95
ZC3H4Q9UPT8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ZC3H4Q9UPT8 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.85□□□□□ -1.95
ZC3H4Q9UPT8 MIR548AO-201ENST00000579992 96 ntBASIC2.85□□□□□ -1.95
ZC3H4Q9UPT8 AL137847.3-201ENST00000611521 109 ntBASIC2.85□□□□□ -1.95
ZC3H4Q9UPT8 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.85□□□□□ -1.95
ZC3H4Q9UPT8 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.85□□□□□ -1.95
ZC3H4Q9UPT8 Y_RNA.426-201ENST00000384068 113 ntBASIC2.84□□□□□ -1.96
ZC3H4Q9UPT8 RNU6-1321P-201ENST00000390905 107 ntBASIC2.84□□□□□ -1.96
ZC3H4Q9UPT8 MIR548G-201ENST00000408442 89 ntBASIC2.84□□□□□ -1.96
ZC3H4Q9UPT8 RNA5SP237-201ENST00000410414 113 ntBASIC2.84□□□□□ -1.96
ZC3H4Q9UPT8 Y_RNA.609-201ENST00000410669 89 ntBASIC2.84□□□□□ -1.96
ZC3H4Q9UPT8 RNA5SP450-201ENST00000411206 102 ntBASIC2.84□□□□□ -1.96
ZC3H4Q9UPT8 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.84□□□□□ -1.96
ZC3H4Q9UPT8 MIR4251-201ENST00000635819 61 ntBASIC2.84□□□□□ -1.96
ZC3H4Q9UPT8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
ZC3H4Q9UPT8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
ZC3H4Q9UPT8 Y_RNA.118-201ENST00000363300 101 ntBASIC2.83□□□□□ -1.96
ZC3H4Q9UPT8 RNA5SP138-201ENST00000365098 114 ntBASIC2.83□□□□□ -1.96
ZC3H4Q9UPT8 Y_RNA.567-201ENST00000384736 106 ntBASIC2.83□□□□□ -1.96
ZC3H4Q9UPT8 AC027119.1-201ENST00000440877 241 ntBASIC2.83□□□□□ -1.96
ZC3H4Q9UPT8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.83□□□□□ -1.96
ZC3H4Q9UPT8 RNU6-90P-201ENST00000606352 106 ntBASIC2.83□□□□□ -1.96
ZC3H4Q9UPT8 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.83□□□□□ -1.96
ZC3H4Q9UPT8 RNU6-1123P-201ENST00000362347 106 ntBASIC2.82□□□□□ -1.96
ZC3H4Q9UPT8 Y_RNA.244-201ENST00000364484 109 ntBASIC2.82□□□□□ -1.96
ZC3H4Q9UPT8 Y_RNA.313-201ENST00000365095 103 ntBASIC2.82□□□□□ -1.96
ZC3H4Q9UPT8 RNU6-203P-201ENST00000384038 104 ntBASIC2.82□□□□□ -1.96
ZC3H4Q9UPT8 MIR17-201ENST00000385012 84 ntBASIC2.82□□□□□ -1.96
ZC3H4Q9UPT8 RNU6-322P-201ENST00000516010 103 ntBASIC2.82□□□□□ -1.96
ZC3H4Q9UPT8 RNU7-137P-201ENST00000516788 62 ntBASIC2.82□□□□□ -1.96
ZC3H4Q9UPT8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.82□□□□□ -1.96
ZC3H4Q9UPT8 MTND5P40-201ENST00000559945 246 ntBASIC2.82□□□□□ -1.96
ZC3H4Q9UPT8 snoU13.31-201ENST00000607291 104 ntBASIC2.82□□□□□ -1.96
ZC3H4Q9UPT8 MIR6840-201ENST00000611937 71 ntBASIC2.82□□□□□ -1.96
ZC3H4Q9UPT8 SNORD38.2-201ENST00000384470 69 ntBASIC2.81□□□□□ -1.96
ZC3H4Q9UPT8 SNORD38B-201ENST00000384690 67 ntBASIC2.81□□□□□ -1.96
ZC3H4Q9UPT8 RNU7-48P-201ENST00000458875 63 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms