Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNU6-1244P-201ENST00000363614 108 ntBASIC2.27□□□□□ -2.05
AP4E1Q9UPM8 RNU6-242P-201ENST00000384359 107 ntBASIC2.27□□□□□ -2.05
AP4E1Q9UPM8 RNA5SP508-201ENST00000411327 119 ntBASIC2.27□□□□□ -2.05
AP4E1Q9UPM8 AL161935.2-201ENST00000414627 60 ntBASIC2.27□□□□□ -2.05
AP4E1Q9UPM8 RNU7-41P-201ENST00000515917 61 ntBASIC2.27□□□□□ -2.05
AP4E1Q9UPM8 RNU7-79P-201ENST00000516082 62 ntBASIC2.27□□□□□ -2.05
AP4E1Q9UPM8 RNA5SP200-201ENST00000516360 103 ntBASIC2.27□□□□□ -2.05
AP4E1Q9UPM8 MIR5694-201ENST00000581190 76 ntBASIC2.27□□□□□ -2.05
AP4E1Q9UPM8 AC104984.5-201ENST00000586878 94 ntBASIC2.27□□□□□ -2.05
AP4E1Q9UPM8 RNU6-86P-201ENST00000606534 107 ntBASIC2.27□□□□□ -2.05
AP4E1Q9UPM8 MIR6132-201ENST00000622083 109 ntBASIC2.27□□□□□ -2.05
AP4E1Q9UPM8 SNORD114-10-201ENST00000363409 72 ntBASIC2.26□□□□□ -2.05
AP4E1Q9UPM8 AC019129.1-201ENST00000403786 261 ntBASIC2.26□□□□□ -2.05
AP4E1Q9UPM8 SNORD23.1-201ENST00000408212 104 ntBASIC2.26□□□□□ -2.05
AP4E1Q9UPM8 MIR1255A-201ENST00000408338 113 ntBASIC2.26□□□□□ -2.05
AP4E1Q9UPM8 RPS29P28-201ENST00000446439 141 ntBASIC2.26□□□□□ -2.05
AP4E1Q9UPM8 AC025521.1-201ENST00000621624 286 ntBASIC2.26□□□□□ -2.05
AP4E1Q9UPM8 MIR4251-201ENST00000635819 61 ntBASIC2.26□□□□□ -2.05
AP4E1Q9UPM8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
AP4E1Q9UPM8 RNU6-865P-201ENST00000364772 107 ntBASIC2.25□□□□□ -2.05
AP4E1Q9UPM8 AC004965.1-201ENST00000413033 213 ntBASIC2.25□□□□□ -2.05
AP4E1Q9UPM8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.25□□□□□ -2.05
AP4E1Q9UPM8 RNU7-171P-201ENST00000459581 62 ntBASIC2.25□□□□□ -2.05
AP4E1Q9UPM8 AC104435.1-201ENST00000483483 166 ntBASIC2.25□□□□□ -2.05
AP4E1Q9UPM8 RNU2-19P-201ENST00000517288 84 ntBASIC2.25□□□□□ -2.05
AP4E1Q9UPM8 DEFB122-202ENST00000569013 197 ntBASIC2.25□□□□□ -2.05
AP4E1Q9UPM8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.25□□□□□ -2.05
AP4E1Q9UPM8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.24□□□□□ -2.05
AP4E1Q9UPM8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
AP4E1Q9UPM8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.24□□□□□ -2.05
AP4E1Q9UPM8 SNORA6-201ENST00000384033 151 ntBASIC2.24□□□□□ -2.05
AP4E1Q9UPM8 RNY1P4-201ENST00000384595 115 ntBASIC2.24□□□□□ -2.05
AP4E1Q9UPM8 SNORA48.3-201ENST00000391081 134 ntBASIC2.24□□□□□ -2.05
AP4E1Q9UPM8 MIR548G-201ENST00000408442 89 ntBASIC2.24□□□□□ -2.05
AP4E1Q9UPM8 AC008413.1-201ENST00000511864 177 ntBASIC2.24□□□□□ -2.05
AP4E1Q9UPM8 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
AP4E1Q9UPM8 AC105081.1-201ENST00000617727 106 ntBASIC2.24□□□□□ -2.05
AP4E1Q9UPM8 MIR6873-201ENST00000622788 63 ntBASIC2.24□□□□□ -2.05
AP4E1Q9UPM8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
AP4E1Q9UPM8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 RNY1P13-201ENST00000365030 105 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 RNU6-447P-201ENST00000410293 104 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 RNU6-1118P-201ENST00000410382 104 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 RNU6-1076P-201ENST00000410397 104 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 RNU6-355P-201ENST00000410427 104 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 RNU6-791P-201ENST00000410467 104 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 RNU6-705P-201ENST00000410601 104 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 RNU6-1100P-201ENST00000410691 104 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 RNU6-860P-201ENST00000410860 104 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 RNU6-1217P-201ENST00000411276 104 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 RNU6-785P-201ENST00000411324 104 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 RPL31P63-201ENST00000422565 375 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 AC055731.1-201ENST00000474387 401 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 SNORD111.1-201ENST00000516421 86 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 SNORD53-201ENST00000579969 78 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 MIR3945-201ENST00000581853 98 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 U6.90-201ENST00000614007 104 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 U6.70-201ENST00000620287 104 ntBASIC2.23□□□□□ -2.05
AP4E1Q9UPM8 SNORD41-201ENST00000386967 70 ntBASIC2.22□□□□□ -2.05
AP4E1Q9UPM8 AL356320.1-201ENST00000429616 163 ntBASIC2.22□□□□□ -2.05
AP4E1Q9UPM8 AC009474.2-201ENST00000451383 136 ntBASIC2.22□□□□□ -2.05
AP4E1Q9UPM8 RNU7-48P-201ENST00000458875 63 ntBASIC2.22□□□□□ -2.05
AP4E1Q9UPM8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.22□□□□□ -2.05
AP4E1Q9UPM8 MIR4666B-201ENST00000578142 81 ntBASIC2.22□□□□□ -2.05
AP4E1Q9UPM8 MIR3935-201ENST00000583472 104 ntBASIC2.22□□□□□ -2.05
AP4E1Q9UPM8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
AP4E1Q9UPM8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.22□□□□□ -2.05
AP4E1Q9UPM8 Y_RNA.173-201ENST00000363776 113 ntBASIC2.21□□□□□ -2.06
AP4E1Q9UPM8 RNA5SP48-201ENST00000363969 126 ntBASIC2.21□□□□□ -2.06
AP4E1Q9UPM8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.21□□□□□ -2.06
AP4E1Q9UPM8 RNU6-322P-201ENST00000516010 103 ntBASIC2.21□□□□□ -2.06
AP4E1Q9UPM8 AC141846.1-201ENST00000568348 142 ntBASIC2.21□□□□□ -2.06
AP4E1Q9UPM8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.21□□□□□ -2.06
AP4E1Q9UPM8 AC020891.4-201ENST00000605745 93 ntBASIC2.21□□□□□ -2.06
AP4E1Q9UPM8 MIR6715A-201ENST00000615929 79 ntBASIC2.21□□□□□ -2.06
AP4E1Q9UPM8 AP000648.3-201ENST00000623539 4507 ntBASIC2.21□□□□□ -2.06
AP4E1Q9UPM8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
AP4E1Q9UPM8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
AP4E1Q9UPM8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
AP4E1Q9UPM8 SNORD38B-201ENST00000384690 67 ntBASIC2.2□□□□□ -2.06
AP4E1Q9UPM8 Y_RNA.567-201ENST00000384736 106 ntBASIC2.2□□□□□ -2.06
AP4E1Q9UPM8 RNA5SP445-201ENST00000515889 115 ntBASIC2.2□□□□□ -2.06
AP4E1Q9UPM8 MIR5002-201ENST00000584713 97 ntBASIC2.2□□□□□ -2.06
AP4E1Q9UPM8 AL662814.1-201ENST00000617364 121 ntBASIC2.2□□□□□ -2.06
AP4E1Q9UPM8 SNORD38B-202ENST00000625943 69 ntBASIC2.2□□□□□ -2.06
AP4E1Q9UPM8 AC006160.2-201ENST00000637708 154 ntBASIC2.2□□□□□ -2.06
AP4E1Q9UPM8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
AP4E1Q9UPM8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
AP4E1Q9UPM8 Y_RNA.4-201ENST00000362333 112 ntBASIC2.19□□□□□ -2.06
AP4E1Q9UPM8 RNU6-509P-201ENST00000363519 107 ntBASIC2.19□□□□□ -2.06
AP4E1Q9UPM8 RNU6-1237P-201ENST00000384777 107 ntBASIC2.19□□□□□ -2.06
AP4E1Q9UPM8 MIR513A1-201ENST00000385138 129 ntBASIC2.19□□□□□ -2.06
AP4E1Q9UPM8 RNU6-279P-201ENST00000391297 101 ntBASIC2.19□□□□□ -2.06
AP4E1Q9UPM8 SNORA3.2-201ENST00000408221 125 ntBASIC2.19□□□□□ -2.06
AP4E1Q9UPM8 Z98742.3-201ENST00000418637 326 ntBASIC2.19□□□□□ -2.06
AP4E1Q9UPM8 RNU6-90P-201ENST00000606352 106 ntBASIC2.19□□□□□ -2.06
AP4E1Q9UPM8 AP001362.1-201ENST00000625165 124 ntBASIC2.19□□□□□ -2.06
AP4E1Q9UPM8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
AP4E1Q9UPM8 Y_RNA.98-201ENST00000363109 102 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 527.1 ms