Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS4AQ9UN37 MIR3152-201ENST00000579801 74 ntBASIC1.31□□□□□ -2.2
VPS4AQ9UN37 AC242498.1-201ENST00000604134 111 ntBASIC1.31□□□□□ -2.2
VPS4AQ9UN37 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VPS4AQ9UN37 MIR103A2-201ENST00000362154 78 ntBASIC1.3□□□□□ -2.2
VPS4AQ9UN37 RNU6-647P-201ENST00000364243 107 ntBASIC1.3□□□□□ -2.2
VPS4AQ9UN37 SNORA1.1-201ENST00000364671 133 ntBASIC1.3□□□□□ -2.2
VPS4AQ9UN37 RNU6-580P-201ENST00000365159 107 ntBASIC1.3□□□□□ -2.2
VPS4AQ9UN37 RNU6-396P-201ENST00000365369 105 ntBASIC1.3□□□□□ -2.2
VPS4AQ9UN37 RNU6-959P-201ENST00000384671 107 ntBASIC1.3□□□□□ -2.2
VPS4AQ9UN37 RPS3AP1-201ENST00000413190 320 ntBASIC1.3□□□□□ -2.2
VPS4AQ9UN37 SNORD79.1-201ENST00000516069 84 ntBASIC1.3□□□□□ -2.2
VPS4AQ9UN37 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.3□□□□□ -2.2
VPS4AQ9UN37 AC022709.1-201ENST00000615967 87 ntBASIC1.3□□□□□ -2.2
VPS4AQ9UN37 MIR6779-201ENST00000617283 64 ntBASIC1.3□□□□□ -2.2
VPS4AQ9UN37 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.3□□□□□ -2.2
VPS4AQ9UN37 MIR6516-201ENST00000630554 81 ntBASIC1.3□□□□□ -2.2
VPS4AQ9UN37 MIR377-201ENST00000362145 69 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 SNORD115-2-201ENST00000362842 82 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 RNA5SP325-201ENST00000363756 130 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 Y_RNA.218-201ENST00000364218 104 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 SNORD115-20-201ENST00000365099 82 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 RNU6-690P-201ENST00000365242 106 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 Y_RNA.366-201ENST00000365540 102 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 MIRLET7F2-201ENST00000385277 83 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 RNU6-893P-201ENST00000458841 100 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 RNU6-1258P-201ENST00000516911 111 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 RNU6-971P-201ENST00000516920 106 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 SEPT14P17-201ENST00000617978 177 ntBASIC1.29□□□□□ -2.2
VPS4AQ9UN37 RNU6-80P-201ENST00000384195 107 ntBASIC1.28□□□□□ -2.2
VPS4AQ9UN37 SNORD12-201ENST00000391002 90 ntBASIC1.28□□□□□ -2.2
VPS4AQ9UN37 SNORA75.2-201ENST00000391138 150 ntBASIC1.28□□□□□ -2.2
VPS4AQ9UN37 SNORA75.3-201ENST00000391231 150 ntBASIC1.28□□□□□ -2.2
VPS4AQ9UN37 RNU7-21P-201ENST00000459430 62 ntBASIC1.28□□□□□ -2.2
VPS4AQ9UN37 RN7SKP19-201ENST00000516016 252 ntBASIC1.28□□□□□ -2.2
VPS4AQ9UN37 RNU2-35P-201ENST00000516446 142 ntBASIC1.28□□□□□ -2.2
VPS4AQ9UN37 MIR2115-201ENST00000516657 100 ntBASIC1.28□□□□□ -2.2
VPS4AQ9UN37 AC133485.4-201ENST00000561835 220 ntBASIC1.28□□□□□ -2.2
VPS4AQ9UN37 AC068338.1-201ENST00000565567 176 ntBASIC1.28□□□□□ -2.2
VPS4AQ9UN37 AC138907.4-201ENST00000570107 226 ntBASIC1.28□□□□□ -2.2
VPS4AQ9UN37 MIR4305-201ENST00000583252 102 ntBASIC1.28□□□□□ -2.2
VPS4AQ9UN37 AL137067.1-201ENST00000615933 120 ntBASIC1.28□□□□□ -2.2
VPS4AQ9UN37 SNORA22.1-201ENST00000362701 134 ntBASIC1.27□□□□□ -2.21
VPS4AQ9UN37 Y_RNA.354-201ENST00000365448 111 ntBASIC1.27□□□□□ -2.21
VPS4AQ9UN37 SNORA80D-201ENST00000384488 135 ntBASIC1.27□□□□□ -2.21
VPS4AQ9UN37 RNU6-342P-201ENST00000384521 104 ntBASIC1.27□□□□□ -2.21
VPS4AQ9UN37 SNORD38B-201ENST00000384690 67 ntBASIC1.27□□□□□ -2.21
VPS4AQ9UN37 RNU4-61P-201ENST00000411243 107 ntBASIC1.27□□□□□ -2.21
VPS4AQ9UN37 RNU6-789P-201ENST00000517105 102 ntBASIC1.27□□□□□ -2.21
VPS4AQ9UN37 RNU6-1223P-201ENST00000517124 104 ntBASIC1.27□□□□□ -2.21
VPS4AQ9UN37 SNORD38B-202ENST00000625943 69 ntBASIC1.27□□□□□ -2.21
VPS4AQ9UN37 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS4AQ9UN37 AC132825.6-201ENST00000638861 357 ntBASIC1.27□□□□□ -2.21
VPS4AQ9UN37 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
VPS4AQ9UN37 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
VPS4AQ9UN37 RNU4-16P-201ENST00000364737 141 ntBASIC1.26□□□□□ -2.21
VPS4AQ9UN37 MIR598-201ENST00000384868 97 ntBASIC1.26□□□□□ -2.21
VPS4AQ9UN37 RNU6-910P-201ENST00000390844 107 ntBASIC1.26□□□□□ -2.21
VPS4AQ9UN37 RNU6-1211P-201ENST00000459179 105 ntBASIC1.26□□□□□ -2.21
VPS4AQ9UN37 MIR4264-201ENST00000583520 66 ntBASIC1.26□□□□□ -2.21
VPS4AQ9UN37 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
VPS4AQ9UN37 RNU6-654P-201ENST00000364373 107 ntBASIC1.25□□□□□ -2.21
VPS4AQ9UN37 Y_RNA.298-201ENST00000364960 107 ntBASIC1.25□□□□□ -2.21
VPS4AQ9UN37 MIR563-201ENST00000385080 79 ntBASIC1.25□□□□□ -2.21
VPS4AQ9UN37 AL591704.2-201ENST00000421658 181 ntBASIC1.25□□□□□ -2.21
VPS4AQ9UN37 RNU7-123P-201ENST00000515911 60 ntBASIC1.25□□□□□ -2.21
VPS4AQ9UN37 AC021443.1-201ENST00000604478 211 ntBASIC1.25□□□□□ -2.21
VPS4AQ9UN37 AC027335.2-201ENST00000624030 375 ntBASIC1.25□□□□□ -2.21
VPS4AQ9UN37 MIR96-201ENST00000362288 78 ntBASIC1.24□□□□□ -2.21
VPS4AQ9UN37 Y_RNA.71-201ENST00000362892 104 ntBASIC1.24□□□□□ -2.21
VPS4AQ9UN37 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.24□□□□□ -2.21
VPS4AQ9UN37 snoU13.2-201ENST00000459201 104 ntBASIC1.24□□□□□ -2.21
VPS4AQ9UN37 RNU7-164P-201ENST00000459221 62 ntBASIC1.24□□□□□ -2.21
VPS4AQ9UN37 RPS29P1-201ENST00000465274 159 ntBASIC1.24□□□□□ -2.21
VPS4AQ9UN37 AC113410.1-201ENST00000505029 247 ntBASIC1.24□□□□□ -2.21
VPS4AQ9UN37 RNU6-659P-201ENST00000516454 104 ntBASIC1.24□□□□□ -2.21
VPS4AQ9UN37 SNORA70.22-201ENST00000517160 124 ntBASIC1.24□□□□□ -2.21
VPS4AQ9UN37 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
VPS4AQ9UN37 Y_RNA.168-201ENST00000363740 102 ntBASIC1.23□□□□□ -2.21
VPS4AQ9UN37 SNORD58C-201ENST00000365223 64 ntBASIC1.23□□□□□ -2.21
VPS4AQ9UN37 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
VPS4AQ9UN37 Y_RNA.531-201ENST00000384589 121 ntBASIC1.23□□□□□ -2.21
VPS4AQ9UN37 MIR520E-201ENST00000384867 87 ntBASIC1.23□□□□□ -2.21
VPS4AQ9UN37 AL022718.1-201ENST00000412004 84 ntBASIC1.23□□□□□ -2.21
VPS4AQ9UN37 AL512326.2-201ENST00000426359 151 ntBASIC1.23□□□□□ -2.21
VPS4AQ9UN37 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS4AQ9UN37 RNU5E-3P-201ENST00000515913 68 ntBASIC1.23□□□□□ -2.21
VPS4AQ9UN37 Y_RNA.712-201ENST00000517011 92 ntBASIC1.23□□□□□ -2.21
VPS4AQ9UN37 AC036111.3-201ENST00000526389 112 ntBASIC1.23□□□□□ -2.21
VPS4AQ9UN37 AC004812.1-201ENST00000540773 146 ntBASIC1.23□□□□□ -2.21
VPS4AQ9UN37 MIR151B-201ENST00000584249 96 ntBASIC1.23□□□□□ -2.21
VPS4AQ9UN37 PVT1_3.1-201ENST00000620853 95 ntBASIC1.23□□□□□ -2.21
VPS4AQ9UN37 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS4AQ9UN37 RNU6-235P-201ENST00000362644 107 ntBASIC1.22□□□□□ -2.21
VPS4AQ9UN37 Y_RNA.171-201ENST00000363760 102 ntBASIC1.22□□□□□ -2.21
VPS4AQ9UN37 RNU1-93P-201ENST00000364704 169 ntBASIC1.22□□□□□ -2.21
VPS4AQ9UN37 SNORD116-14-201ENST00000383894 92 ntBASIC1.22□□□□□ -2.21
VPS4AQ9UN37 SNORD116-17-201ENST00000383929 92 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms