Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 MIR8066-201ENST00000617280 78 ntBASIC0.26□□□□□ -2.37
RIMS3Q9UJD0 AC021613.1-201ENST00000623880 111 ntBASIC0.26□□□□□ -2.37
RIMS3Q9UJD0 MIR6841-201ENST00000637129 72 ntBASIC0.26□□□□□ -2.37
RIMS3Q9UJD0 Y_RNA.42-201ENST00000362660 108 ntBASIC0.25□□□□□ -2.37
RIMS3Q9UJD0 RNU6-978P-201ENST00000364371 103 ntBASIC0.25□□□□□ -2.37
RIMS3Q9UJD0 Y_RNA.288-201ENST00000364854 92 ntBASIC0.25□□□□□ -2.37
RIMS3Q9UJD0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
RIMS3Q9UJD0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
RIMS3Q9UJD0 RNU6-42P-201ENST00000384165 107 ntBASIC0.25□□□□□ -2.37
RIMS3Q9UJD0 RNA5SP127-201ENST00000411051 133 ntBASIC0.25□□□□□ -2.37
RIMS3Q9UJD0 RNU6-893P-201ENST00000458841 100 ntBASIC0.25□□□□□ -2.37
RIMS3Q9UJD0 SNORD127-201ENST00000458892 86 ntBASIC0.25□□□□□ -2.37
RIMS3Q9UJD0 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
RIMS3Q9UJD0 MIR4711-201ENST00000578274 70 ntBASIC0.25□□□□□ -2.37
RIMS3Q9UJD0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.25□□□□□ -2.37
RIMS3Q9UJD0 Y_RNA.47-201ENST00000362697 108 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 SNORA22.1-201ENST00000362701 134 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 Y_RNA.116-201ENST00000363292 103 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 Y_RNA.121-201ENST00000363309 113 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 RNU6-597P-201ENST00000365620 102 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 Y_RNA.515-201ENST00000384535 112 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 MIR624-201ENST00000385217 97 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 MIR936-201ENST00000401264 98 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 RNU2-38P-201ENST00000410856 79 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 RNU6-1132P-201ENST00000459214 107 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 Y_RNA.797-201ENST00000515977 94 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 RNU6-469P-201ENST00000516253 101 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 AC022523.2-201ENST00000561045 150 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 AC141846.1-201ENST00000568348 142 ntBASIC0.24□□□□□ -2.37
RIMS3Q9UJD0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
RIMS3Q9UJD0 RNU6-403P-201ENST00000363163 104 ntBASIC0.23□□□□□ -2.37
RIMS3Q9UJD0 Y_RNA.308-201ENST00000365043 101 ntBASIC0.23□□□□□ -2.37
RIMS3Q9UJD0 SNORA8.2-201ENST00000384372 139 ntBASIC0.23□□□□□ -2.37
RIMS3Q9UJD0 Y_RNA.567-201ENST00000384736 106 ntBASIC0.23□□□□□ -2.37
RIMS3Q9UJD0 U8.15-201ENST00000390947 134 ntBASIC0.23□□□□□ -2.37
RIMS3Q9UJD0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.23□□□□□ -2.37
RIMS3Q9UJD0 MTND1P19-201ENST00000511780 315 ntBASIC0.23□□□□□ -2.37
RIMS3Q9UJD0 RNU6-765P-201ENST00000516916 99 ntBASIC0.23□□□□□ -2.37
RIMS3Q9UJD0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
RIMS3Q9UJD0 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
RIMS3Q9UJD0 AC022709.1-201ENST00000615967 87 ntBASIC0.23□□□□□ -2.37
RIMS3Q9UJD0 MIR103A1-201ENST00000362165 78 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 Y_RNA.13-201ENST00000362403 112 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 SNORD44.1-201ENST00000363202 61 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 SNORD118-201ENST00000363593 134 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 RNY4P28-201ENST00000365281 93 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 Y_RNA.459-201ENST00000384251 102 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 RNU6-738P-201ENST00000384531 106 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 Y_RNA.556-201ENST00000384677 113 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 MIR518E-201ENST00000385252 88 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 RNU6-493P-201ENST00000391321 108 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 RNA5SP193-201ENST00000410353 107 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 RNY3P16-201ENST00000516338 101 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 SCARNA15-202ENST00000516881 127 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 AC133485.4-201ENST00000561835 220 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 RNU2-4P-201ENST00000606190 192 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 MIR6082-201ENST00000613604 109 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 AL589743.1-201ENST00000551932 2712 ntBASIC0.22□□□□□ -2.37
RIMS3Q9UJD0 RNU6-949P-201ENST00000384040 107 ntBASIC0.21□□□□□ -2.38
RIMS3Q9UJD0 Y_RNA.562-201ENST00000384695 113 ntBASIC0.21□□□□□ -2.38
RIMS3Q9UJD0 Y_RNA.617-201ENST00000410920 90 ntBASIC0.21□□□□□ -2.38
RIMS3Q9UJD0 RNU5E-9P-201ENST00000411164 104 ntBASIC0.21□□□□□ -2.38
RIMS3Q9UJD0 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
RIMS3Q9UJD0 RNU6-863P-201ENST00000515989 104 ntBASIC0.21□□□□□ -2.38
RIMS3Q9UJD0 RNU6-1149P-201ENST00000516810 97 ntBASIC0.21□□□□□ -2.38
RIMS3Q9UJD0 SNORA25.18-201ENST00000607153 114 ntBASIC0.21□□□□□ -2.38
RIMS3Q9UJD0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
RIMS3Q9UJD0 Y_RNA.174-201ENST00000363781 105 ntBASIC0.2□□□□□ -2.38
RIMS3Q9UJD0 SNORA25.7-201ENST00000364375 127 ntBASIC0.2□□□□□ -2.38
RIMS3Q9UJD0 RNU6-643P-201ENST00000384018 107 ntBASIC0.2□□□□□ -2.38
RIMS3Q9UJD0 SNORA18-201ENST00000384416 132 ntBASIC0.2□□□□□ -2.38
RIMS3Q9UJD0 Y_RNA.588-201ENST00000391254 102 ntBASIC0.2□□□□□ -2.38
RIMS3Q9UJD0 AL358176.2-201ENST00000425769 204 ntBASIC0.2□□□□□ -2.38
RIMS3Q9UJD0 AL512326.2-201ENST00000426359 151 ntBASIC0.2□□□□□ -2.38
RIMS3Q9UJD0 RNA5SP436-201ENST00000516020 115 ntBASIC0.2□□□□□ -2.38
RIMS3Q9UJD0 MIR4491-201ENST00000581087 68 ntBASIC0.2□□□□□ -2.38
RIMS3Q9UJD0 RNU6-1099P-201ENST00000363533 107 ntBASIC0.19□□□□□ -2.38
RIMS3Q9UJD0 SNORD27-201ENST00000363981 72 ntBASIC0.19□□□□□ -2.38
RIMS3Q9UJD0 RNU4-70P-201ENST00000384579 139 ntBASIC0.19□□□□□ -2.38
RIMS3Q9UJD0 RNU6-1011P-201ENST00000384668 107 ntBASIC0.19□□□□□ -2.38
RIMS3Q9UJD0 Y_RNA.571-201ENST00000384753 98 ntBASIC0.19□□□□□ -2.38
RIMS3Q9UJD0 RNU6-1086P-201ENST00000410930 100 ntBASIC0.19□□□□□ -2.38
RIMS3Q9UJD0 RNU6-135P-201ENST00000516769 101 ntBASIC0.19□□□□□ -2.38
RIMS3Q9UJD0 RNA5SP62-201ENST00000363457 110 ntBASIC0.18□□□□□ -2.38
RIMS3Q9UJD0 Y_RNA.182-201ENST00000363880 111 ntBASIC0.18□□□□□ -2.38
RIMS3Q9UJD0 RNU4-16P-201ENST00000364737 141 ntBASIC0.18□□□□□ -2.38
RIMS3Q9UJD0 SNORA72.6-201ENST00000384520 129 ntBASIC0.18□□□□□ -2.38
RIMS3Q9UJD0 MIR644A-201ENST00000385262 94 ntBASIC0.18□□□□□ -2.38
RIMS3Q9UJD0 MIR1302-3-201ENST00000408128 138 ntBASIC0.18□□□□□ -2.38
RIMS3Q9UJD0 Y_RNA.65-201ENST00000362846 100 ntBASIC0.17□□□□□ -2.38
RIMS3Q9UJD0 SNORA36.1-201ENST00000363424 132 ntBASIC0.17□□□□□ -2.38
RIMS3Q9UJD0 Y_RNA.269-201ENST00000364685 89 ntBASIC0.17□□□□□ -2.38
RIMS3Q9UJD0 RNU6-923P-201ENST00000364753 107 ntBASIC0.17□□□□□ -2.38
RIMS3Q9UJD0 RNU6-275P-201ENST00000364910 107 ntBASIC0.17□□□□□ -2.38
RIMS3Q9UJD0 RNY1P6-201ENST00000384193 109 ntBASIC0.17□□□□□ -2.38
RIMS3Q9UJD0 Y_RNA.478-201ENST00000384358 107 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 233.5 ms