Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 RNU7-113P-201ENST00000459273 62 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 RN7SL274P-201ENST00000492268 272 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 AC113410.1-201ENST00000505029 247 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 RNA5SP170-201ENST00000517150 101 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 MIR548AO-201ENST00000579992 96 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 MIR548AE2-201ENST00000583456 67 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 MIR378A-201ENST00000362177 66 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 RNU6-766P-201ENST00000362478 107 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 Y_RNA.49-201ENST00000362714 112 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 SNORD115-2-201ENST00000362842 82 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 SNORD115-20-201ENST00000365099 82 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 RNA5SP259-201ENST00000365541 109 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 Y_RNA.430-201ENST00000384081 110 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 SNORA51.5-201ENST00000384126 131 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 RNU6-905P-201ENST00000384434 107 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 MIR759-201ENST00000390224 91 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 SNORA67.5-201ENST00000391036 107 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 AL353813.1-201ENST00000440700 253 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 RNA5SP445-201ENST00000515889 115 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 RNU6-109P-201ENST00000516364 107 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 RNU6-184P-201ENST00000516514 107 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 RNU7-43P-201ENST00000516554 64 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 MIR4255-201ENST00000579351 72 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 AL162726.3-218ENST00000636401 95 ntBASIC1.65□□□□□ -2.15
LRIT1Q9P2V4 SNORD115-19-201ENST00000363098 82 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 SNORD115-18-201ENST00000363293 82 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 RNU6-640P-201ENST00000363693 105 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 SNORD115-17-201ENST00000364612 82 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 Y_RNA.466-201ENST00000384294 113 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 MIR499A-201ENST00000384903 122 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 MIR520C-201ENST00000385005 87 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 MIR590-201ENST00000385008 97 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 snoU13.25-201ENST00000458945 104 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 snoU13.16-201ENST00000459350 104 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 RNU6-922P-201ENST00000516753 99 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 AC015688.6-201ENST00000577737 104 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 MIR3192-201ENST00000584920 77 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 AC012493.3-201ENST00000604494 112 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 MIR8065-201ENST00000620577 100 ntBASIC1.64□□□□□ -2.15
LRIT1Q9P2V4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 Y_RNA.43-201ENST00000362670 111 ntBASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 SNORA1.1-201ENST00000364671 133 ntBASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 RNU6-342P-201ENST00000384521 104 ntBASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 RNU6-816P-201ENST00000390914 107 ntBASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 RNU6-1268P-201ENST00000391214 107 ntBASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 RNU6-1239P-201ENST00000391310 107 ntBASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 RNU6-602P-201ENST00000411155 105 ntBASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 BTF3P4-201ENST00000418852 495 ntBASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 HSPE1P24-201ENST00000450782 238 ntBASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 RNA5SP33-201ENST00000516687 98 ntBASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 AP001318.4-201ENST00000616637 121 ntBASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LRIT1Q9P2V4 RNY1P10-201ENST00000363268 113 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 RNU6-1255P-201ENST00000363434 112 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 Y_RNA.309-201ENST00000365046 111 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 SNORA25.9-201ENST00000365087 128 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 SNORA32-201ENST00000384072 121 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 RNU6-616P-201ENST00000384353 107 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 MIR1302-5-201ENST00000408164 150 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 RNU4-62P-201ENST00000410125 130 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 RNU4-69P-201ENST00000410677 143 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 Y_RNA.677-201ENST00000516401 85 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 MIR3152-201ENST00000579801 74 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 MIR4303-201ENST00000581299 66 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 MIR4422-201ENST00000581938 83 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 AL096861.1-201ENST00000610899 123 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 Z97988.1-201ENST00000637697 135 ntBASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
LRIT1Q9P2V4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
LRIT1Q9P2V4 MIR605-201ENST00000385078 83 ntBASIC1.61□□□□□ -2.15
LRIT1Q9P2V4 MIR518E-201ENST00000385252 88 ntBASIC1.61□□□□□ -2.15
LRIT1Q9P2V4 MIR1302-7-201ENST00000408841 72 ntBASIC1.61□□□□□ -2.15
LRIT1Q9P2V4 RNU6-321P-201ENST00000410912 106 ntBASIC1.61□□□□□ -2.15
LRIT1Q9P2V4 RPL39P25-201ENST00000449384 154 ntBASIC1.61□□□□□ -2.15
LRIT1Q9P2V4 AC009474.2-201ENST00000451383 136 ntBASIC1.61□□□□□ -2.15
LRIT1Q9P2V4 MIR3122-201ENST00000577243 73 ntBASIC1.61□□□□□ -2.15
LRIT1Q9P2V4 MIR8063-201ENST00000621930 81 ntBASIC1.61□□□□□ -2.15
LRIT1Q9P2V4 MIR4251-201ENST00000635819 61 ntBASIC1.61□□□□□ -2.15
LRIT1Q9P2V4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
LRIT1Q9P2V4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.6□□□□□ -2.15
LRIT1Q9P2V4 RPS3AP1-201ENST00000413190 320 ntBASIC1.6□□□□□ -2.15
LRIT1Q9P2V4 TRMT112P2-201ENST00000512910 132 ntBASIC1.6□□□□□ -2.15
LRIT1Q9P2V4 RNU6-904P-201ENST00000516206 101 ntBASIC1.6□□□□□ -2.15
LRIT1Q9P2V4 SNORD111.1-201ENST00000516421 86 ntBASIC1.6□□□□□ -2.15
LRIT1Q9P2V4 AC141557.1-201ENST00000540982 400 ntBASIC1.6□□□□□ -2.15
LRIT1Q9P2V4 MIR5582-201ENST00000579697 68 ntBASIC1.6□□□□□ -2.15
LRIT1Q9P2V4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.6□□□□□ -2.15
LRIT1Q9P2V4 MIR4679-1-201ENST00000637619 75 ntBASIC1.6□□□□□ -2.15
LRIT1Q9P2V4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
LRIT1Q9P2V4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
LRIT1Q9P2V4 MIR302D-201ENST00000362275 68 ntBASIC1.59□□□□□ -2.15
LRIT1Q9P2V4 SNORD48-201ENST00000364953 64 ntBASIC1.59□□□□□ -2.15
LRIT1Q9P2V4 RNU6-679P-201ENST00000391003 106 ntBASIC1.59□□□□□ -2.15
LRIT1Q9P2V4 RNU6-1307P-201ENST00000391012 103 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 349.9 ms