Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNU6-1082P-201ENST00000364574 107 ntBASIC0.92□□□□□ -2.26
HCN3Q9P1Z3 RNU4-16P-201ENST00000364737 141 ntBASIC0.92□□□□□ -2.26
HCN3Q9P1Z3 SNORD37.2-201ENST00000391075 66 ntBASIC0.92□□□□□ -2.26
HCN3Q9P1Z3 SNORA26.6-201ENST00000391256 115 ntBASIC0.92□□□□□ -2.26
HCN3Q9P1Z3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.92□□□□□ -2.26
HCN3Q9P1Z3 RNU7-120P-201ENST00000459334 63 ntBASIC0.92□□□□□ -2.26
HCN3Q9P1Z3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.92□□□□□ -2.26
HCN3Q9P1Z3 RNU6-113P-201ENST00000516653 101 ntBASIC0.92□□□□□ -2.26
HCN3Q9P1Z3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.92□□□□□ -2.26
HCN3Q9P1Z3 AC090425.1-201ENST00000610007 140 ntBASIC0.92□□□□□ -2.26
HCN3Q9P1Z3 RNU6-818P-201ENST00000364837 108 ntBASIC0.91□□□□□ -2.26
HCN3Q9P1Z3 RNU6-1319P-201ENST00000390855 104 ntBASIC0.91□□□□□ -2.26
HCN3Q9P1Z3 RNU6-747P-201ENST00000390928 104 ntBASIC0.91□□□□□ -2.26
HCN3Q9P1Z3 RNU6-239P-201ENST00000390990 99 ntBASIC0.91□□□□□ -2.26
HCN3Q9P1Z3 RNU6-241P-201ENST00000391148 104 ntBASIC0.91□□□□□ -2.26
HCN3Q9P1Z3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.91□□□□□ -2.26
HCN3Q9P1Z3 MIR1827-201ENST00000408549 66 ntBASIC0.91□□□□□ -2.26
HCN3Q9P1Z3 RNU6-177P-201ENST00000411257 104 ntBASIC0.91□□□□□ -2.26
HCN3Q9P1Z3 snoU13.2-201ENST00000459201 104 ntBASIC0.91□□□□□ -2.26
HCN3Q9P1Z3 Y_RNA.700-201ENST00000516806 100 ntBASIC0.91□□□□□ -2.26
HCN3Q9P1Z3 AC025627.3-201ENST00000582078 182 ntBASIC0.91□□□□□ -2.26
HCN3Q9P1Z3 AC004792.1-201ENST00000614523 137 ntBASIC0.91□□□□□ -2.26
HCN3Q9P1Z3 AC021613.1-201ENST00000623880 111 ntBASIC0.91□□□□□ -2.26
HCN3Q9P1Z3 Y_RNA.52-201ENST00000362760 96 ntBASIC0.9□□□□□ -2.27
HCN3Q9P1Z3 Y_RNA.240-201ENST00000364469 95 ntBASIC0.9□□□□□ -2.27
HCN3Q9P1Z3 RNU1-36P-201ENST00000365130 165 ntBASIC0.9□□□□□ -2.27
HCN3Q9P1Z3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.9□□□□□ -2.27
HCN3Q9P1Z3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.9□□□□□ -2.27
HCN3Q9P1Z3 RNU6-588P-201ENST00000410281 105 ntBASIC0.9□□□□□ -2.27
HCN3Q9P1Z3 RPS26P5-201ENST00000418544 335 ntBASIC0.9□□□□□ -2.27
HCN3Q9P1Z3 RNA5SP436-201ENST00000516020 115 ntBASIC0.9□□□□□ -2.27
HCN3Q9P1Z3 RN7SL793P-201ENST00000583259 296 ntBASIC0.9□□□□□ -2.27
HCN3Q9P1Z3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.9□□□□□ -2.27
HCN3Q9P1Z3 uc_338.6-201ENST00000613544 171 ntBASIC0.9□□□□□ -2.27
HCN3Q9P1Z3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.9□□□□□ -2.27
HCN3Q9P1Z3 AC023934.1-201ENST00000574529 2389 ntBASIC0.89□□□□□ -2.27
HCN3Q9P1Z3 RNU4-84P-201ENST00000364200 139 ntBASIC0.89□□□□□ -2.27
HCN3Q9P1Z3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
HCN3Q9P1Z3 SNORA75.5-201ENST00000391291 81 ntBASIC0.89□□□□□ -2.27
HCN3Q9P1Z3 SNORD99-201ENST00000408612 74 ntBASIC0.89□□□□□ -2.27
HCN3Q9P1Z3 RNU5E-9P-201ENST00000411164 104 ntBASIC0.89□□□□□ -2.27
HCN3Q9P1Z3 AC113410.1-201ENST00000505029 247 ntBASIC0.89□□□□□ -2.27
HCN3Q9P1Z3 RNU6-977P-201ENST00000516411 103 ntBASIC0.89□□□□□ -2.27
HCN3Q9P1Z3 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
HCN3Q9P1Z3 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
HCN3Q9P1Z3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
HCN3Q9P1Z3 RNU6-682P-201ENST00000363843 106 ntBASIC0.88□□□□□ -2.27
HCN3Q9P1Z3 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
HCN3Q9P1Z3 MIR605-201ENST00000385078 83 ntBASIC0.88□□□□□ -2.27
HCN3Q9P1Z3 RNA5SP237-201ENST00000410414 113 ntBASIC0.88□□□□□ -2.27
HCN3Q9P1Z3 MIR5000-201ENST00000577717 103 ntBASIC0.88□□□□□ -2.27
HCN3Q9P1Z3 MIR3658-201ENST00000636291 56 ntBASIC0.88□□□□□ -2.27
HCN3Q9P1Z3 SNORA22.1-201ENST00000362701 134 ntBASIC0.87□□□□□ -2.27
HCN3Q9P1Z3 Y_RNA.785-201ENST00000384290 109 ntBASIC0.87□□□□□ -2.27
HCN3Q9P1Z3 RNY1P4-201ENST00000384595 115 ntBASIC0.87□□□□□ -2.27
HCN3Q9P1Z3 MIR520F-201ENST00000384824 87 ntBASIC0.87□□□□□ -2.27
HCN3Q9P1Z3 SNORD105-201ENST00000386910 85 ntBASIC0.87□□□□□ -2.27
HCN3Q9P1Z3 RNU2-64P-201ENST00000411315 191 ntBASIC0.87□□□□□ -2.27
HCN3Q9P1Z3 MIR18B-201ENST00000454574 71 ntBASIC0.87□□□□□ -2.27
HCN3Q9P1Z3 RNU6-182P-201ENST00000516970 105 ntBASIC0.87□□□□□ -2.27
HCN3Q9P1Z3 DNAJC19P2-201ENST00000593340 302 ntBASIC0.87□□□□□ -2.27
HCN3Q9P1Z3 AL353765.1-201ENST00000605514 183 ntBASIC0.87□□□□□ -2.27
HCN3Q9P1Z3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HCN3Q9P1Z3 Y_RNA.430-201ENST00000384081 110 ntBASIC0.86□□□□□ -2.27
HCN3Q9P1Z3 RNY1P6-201ENST00000384193 109 ntBASIC0.86□□□□□ -2.27
HCN3Q9P1Z3 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
HCN3Q9P1Z3 MIR216A-201ENST00000385063 110 ntBASIC0.86□□□□□ -2.27
HCN3Q9P1Z3 RPL39P25-201ENST00000449384 154 ntBASIC0.86□□□□□ -2.27
HCN3Q9P1Z3 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
HCN3Q9P1Z3 AC074198.2-201ENST00000508153 258 ntBASIC0.86□□□□□ -2.27
HCN3Q9P1Z3 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
HCN3Q9P1Z3 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
HCN3Q9P1Z3 MIR3646-201ENST00000578301 84 ntBASIC0.86□□□□□ -2.27
HCN3Q9P1Z3 RNU6-1318P-201ENST00000365389 103 ntBASIC0.85□□□□□ -2.27
HCN3Q9P1Z3 MIR3973-201ENST00000579824 107 ntBASIC0.85□□□□□ -2.27
HCN3Q9P1Z3 MIR4676-201ENST00000583078 72 ntBASIC0.85□□□□□ -2.27
HCN3Q9P1Z3 AC020891.4-201ENST00000605745 93 ntBASIC0.85□□□□□ -2.27
HCN3Q9P1Z3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HCN3Q9P1Z3 RNU6-369P-201ENST00000362515 102 ntBASIC0.84□□□□□ -2.27
HCN3Q9P1Z3 Y_RNA.272-201ENST00000364696 102 ntBASIC0.84□□□□□ -2.27
HCN3Q9P1Z3 SNORD18B-201ENST00000365659 72 ntBASIC0.84□□□□□ -2.27
HCN3Q9P1Z3 Y_RNA.497-201ENST00000384447 98 ntBASIC0.84□□□□□ -2.27
HCN3Q9P1Z3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.84□□□□□ -2.27
HCN3Q9P1Z3 RNU6-893P-201ENST00000458841 100 ntBASIC0.84□□□□□ -2.27
HCN3Q9P1Z3 RNU7-121P-201ENST00000516604 62 ntBASIC0.84□□□□□ -2.27
HCN3Q9P1Z3 AC011195.1-201ENST00000578177 177 ntBASIC0.84□□□□□ -2.27
HCN3Q9P1Z3 MIR520H-201ENST00000385126 88 ntBASIC0.83□□□□□ -2.28
HCN3Q9P1Z3 MIR1257-201ENST00000408490 117 ntBASIC0.83□□□□□ -2.28
HCN3Q9P1Z3 MTATP6P21-201ENST00000440681 189 ntBASIC0.83□□□□□ -2.28
HCN3Q9P1Z3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
HCN3Q9P1Z3 AC104465.1-201ENST00000611365 139 ntBASIC0.83□□□□□ -2.28
HCN3Q9P1Z3 MIR6841-201ENST00000637129 72 ntBASIC0.83□□□□□ -2.28
HCN3Q9P1Z3 MIR373-201ENST00000362273 69 ntBASIC0.82□□□□□ -2.28
HCN3Q9P1Z3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.82□□□□□ -2.28
HCN3Q9P1Z3 RNU6-690P-201ENST00000365242 106 ntBASIC0.82□□□□□ -2.28
HCN3Q9P1Z3 Y_RNA.441-201ENST00000384123 112 ntBASIC0.82□□□□□ -2.28
HCN3Q9P1Z3 RNU6-364P-201ENST00000384387 107 ntBASIC0.82□□□□□ -2.28
HCN3Q9P1Z3 MIR563-201ENST00000385080 79 ntBASIC0.82□□□□□ -2.28
HCN3Q9P1Z3 MT-TF-201ENST00000387314 71 ntBASIC0.82□□□□□ -2.28
HCN3Q9P1Z3 Y_RNA.584-201ENST00000391090 114 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 259.9 ms