Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 AC015818.7-201ENST00000428754 109 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 AC087499.7-201ENST00000441958 109 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 PDCD5P2-201ENST00000507570 312 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 RNA5SP272-201ENST00000516095 111 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 RNU6-113P-201ENST00000516653 101 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 AC133485.4-201ENST00000561835 220 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 AC138907.4-201ENST00000570107 226 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 MIR3660-201ENST00000584845 100 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 AL157834.3-201ENST00000615543 103 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 AL353770.2-201ENST00000620024 78 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 MIR1-1-201ENST00000362147 71 ntBASIC1.02□□□□□ -2.25
LIN7CQ9NUP9 RNA5SP237-201ENST00000410414 113 ntBASIC1.02□□□□□ -2.25
LIN7CQ9NUP9 AL022718.1-201ENST00000412004 84 ntBASIC1.02□□□□□ -2.25
LIN7CQ9NUP9 AL603825.1-201ENST00000438481 80 ntBASIC1.02□□□□□ -2.25
LIN7CQ9NUP9 AC004223.1-201ENST00000479840 271 ntBASIC1.02□□□□□ -2.25
LIN7CQ9NUP9 AP001328.1-201ENST00000528550 176 ntBASIC1.02□□□□□ -2.25
LIN7CQ9NUP9 AL391516.1-201ENST00000554380 2449 ntBASIC1.02□□□□□ -2.25
LIN7CQ9NUP9 MIR4771-2-201ENST00000577758 74 ntBASIC1.02□□□□□ -2.25
LIN7CQ9NUP9 MIR4771-1-201ENST00000582617 74 ntBASIC1.02□□□□□ -2.25
LIN7CQ9NUP9 MIR4305-201ENST00000583252 102 ntBASIC1.02□□□□□ -2.25
LIN7CQ9NUP9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.02□□□□□ -2.25
LIN7CQ9NUP9 MIR100-201ENST00000385259 80 ntBASIC1.01□□□□□ -2.25
LIN7CQ9NUP9 MIR1285-1-201ENST00000408593 84 ntBASIC1.01□□□□□ -2.25
LIN7CQ9NUP9 MIR18B-201ENST00000454574 71 ntBASIC1.01□□□□□ -2.25
LIN7CQ9NUP9 RNU6-346P-201ENST00000516288 111 ntBASIC1.01□□□□□ -2.25
LIN7CQ9NUP9 RNA5SP255-201ENST00000516370 107 ntBASIC1.01□□□□□ -2.25
LIN7CQ9NUP9 RNU6-426P-201ENST00000516464 97 ntBASIC1.01□□□□□ -2.25
LIN7CQ9NUP9 AC021443.1-201ENST00000604478 211 ntBASIC1.01□□□□□ -2.25
LIN7CQ9NUP9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.01□□□□□ -2.25
LIN7CQ9NUP9 MIR30D-201ENST00000362283 70 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 Y_RNA.366-201ENST00000365540 102 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 SNORA18-201ENST00000384416 132 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 RNU6-342P-201ENST00000384521 104 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 MIR1827-201ENST00000408549 66 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 RPS26P5-201ENST00000418544 335 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 RNU7-113P-201ENST00000459273 62 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 U7.7-201ENST00000459276 60 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
LIN7CQ9NUP9 UBL5P1-201ENST00000507979 193 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 AC108729.3-201ENST00000513484 108 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 RNU2-35P-201ENST00000516446 142 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 Y_RNA.692-201ENST00000516627 105 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 MIR4498-201ENST00000577599 66 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 MIR3121-201ENST00000579680 77 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 AC108081.1-201ENST00000604358 221 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 AL662814.1-201ENST00000617364 121 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 AP001340.1-201ENST00000624405 217 ntBASIC1□□□□□ -2.25
LIN7CQ9NUP9 RNU6-369P-201ENST00000362515 102 ntBASIC0.99□□□□□ -2.25
LIN7CQ9NUP9 RNU6-1335P-201ENST00000365426 107 ntBASIC0.99□□□□□ -2.25
LIN7CQ9NUP9 Y_RNA.506-201ENST00000384494 102 ntBASIC0.99□□□□□ -2.25
LIN7CQ9NUP9 AL512326.2-201ENST00000426359 151 ntBASIC0.99□□□□□ -2.25
LIN7CQ9NUP9 RNU7-164P-201ENST00000459221 62 ntBASIC0.99□□□□□ -2.25
LIN7CQ9NUP9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.99□□□□□ -2.25
LIN7CQ9NUP9 RNU6-1110P-201ENST00000516462 101 ntBASIC0.99□□□□□ -2.25
LIN7CQ9NUP9 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
LIN7CQ9NUP9 MIR6078-201ENST00000611069 100 ntBASIC0.99□□□□□ -2.25
LIN7CQ9NUP9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
LIN7CQ9NUP9 RNY1P5-201ENST00000383890 115 ntBASIC0.98□□□□□ -2.25
LIN7CQ9NUP9 Y_RNA.470-201ENST00000384307 117 ntBASIC0.98□□□□□ -2.25
LIN7CQ9NUP9 MT-TF-201ENST00000387314 71 ntBASIC0.98□□□□□ -2.25
LIN7CQ9NUP9 RNA5SP33-201ENST00000516687 98 ntBASIC0.98□□□□□ -2.25
LIN7CQ9NUP9 AC004812.1-201ENST00000540773 146 ntBASIC0.98□□□□□ -2.25
LIN7CQ9NUP9 AC020891.4-201ENST00000605745 93 ntBASIC0.98□□□□□ -2.25
LIN7CQ9NUP9 AL136317.1-201ENST00000612653 226 ntBASIC0.98□□□□□ -2.25
LIN7CQ9NUP9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.98□□□□□ -2.25
LIN7CQ9NUP9 AC023934.1-201ENST00000574529 2389 ntBASIC0.97□□□□□ -2.25
LIN7CQ9NUP9 Y_RNA.294-201ENST00000364916 102 ntBASIC0.97□□□□□ -2.25
LIN7CQ9NUP9 Y_RNA.343-201ENST00000365354 112 ntBASIC0.97□□□□□ -2.25
LIN7CQ9NUP9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.97□□□□□ -2.25
LIN7CQ9NUP9 RNU7-123P-201ENST00000515911 60 ntBASIC0.97□□□□□ -2.25
LIN7CQ9NUP9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.97□□□□□ -2.25
LIN7CQ9NUP9 AC141846.1-201ENST00000568348 142 ntBASIC0.97□□□□□ -2.25
LIN7CQ9NUP9 MIR4676-201ENST00000583078 72 ntBASIC0.97□□□□□ -2.25
LIN7CQ9NUP9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.97□□□□□ -2.25
LIN7CQ9NUP9 AL137067.1-201ENST00000615933 120 ntBASIC0.97□□□□□ -2.25
LIN7CQ9NUP9 Y_RNA.338-201ENST00000365320 114 ntBASIC0.96□□□□□ -2.26
LIN7CQ9NUP9 Y_RNA.531-201ENST00000384589 121 ntBASIC0.96□□□□□ -2.26
LIN7CQ9NUP9 RNU6-977P-201ENST00000516411 103 ntBASIC0.96□□□□□ -2.26
LIN7CQ9NUP9 SNORA4-201ENST00000584302 138 ntBASIC0.96□□□□□ -2.26
LIN7CQ9NUP9 AL359821.1-201ENST00000605519 182 ntBASIC0.96□□□□□ -2.26
LIN7CQ9NUP9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
LIN7CQ9NUP9 SNORD115-2-201ENST00000362842 82 ntBASIC0.95□□□□□ -2.26
LIN7CQ9NUP9 Y_RNA.114-201ENST00000363265 113 ntBASIC0.95□□□□□ -2.26
LIN7CQ9NUP9 Y_RNA.298-201ENST00000364960 107 ntBASIC0.95□□□□□ -2.26
LIN7CQ9NUP9 SNORD115-20-201ENST00000365099 82 ntBASIC0.95□□□□□ -2.26
LIN7CQ9NUP9 Y_RNA.327-201ENST00000365201 102 ntBASIC0.95□□□□□ -2.26
LIN7CQ9NUP9 RNU6-1062P-201ENST00000383908 107 ntBASIC0.95□□□□□ -2.26
LIN7CQ9NUP9 RPL39P25-201ENST00000449384 154 ntBASIC0.95□□□□□ -2.26
LIN7CQ9NUP9 RNU7-185P-201ENST00000459215 60 ntBASIC0.95□□□□□ -2.26
LIN7CQ9NUP9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.95□□□□□ -2.26
LIN7CQ9NUP9 U7.2-201ENST00000607576 63 ntBASIC0.95□□□□□ -2.26
LIN7CQ9NUP9 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.95□□□□□ -2.26
LIN7CQ9NUP9 SNORA32-201ENST00000384072 121 ntBASIC0.94□□□□□ -2.26
LIN7CQ9NUP9 MIR520F-201ENST00000384824 87 ntBASIC0.94□□□□□ -2.26
LIN7CQ9NUP9 MIR1257-201ENST00000408490 117 ntBASIC0.94□□□□□ -2.26
LIN7CQ9NUP9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.94□□□□□ -2.26
LIN7CQ9NUP9 AC025627.3-201ENST00000582078 182 ntBASIC0.94□□□□□ -2.26
LIN7CQ9NUP9 AC091895.1-201ENST00000624494 256 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms