Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 RNU6-30P-201ENST00000384561 107 ntBASIC-1.16□□□□□ -2.6
TREM1Q9NP99 MIR626-201ENST00000385032 94 ntBASIC-1.16□□□□□ -2.6
TREM1Q9NP99 snoU13.11-201ENST00000459219 104 ntBASIC-1.16□□□□□ -2.6
TREM1Q9NP99 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.16□□□□□ -2.6
TREM1Q9NP99 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.16□□□□□ -2.6
TREM1Q9NP99 MIR4724-201ENST00000579485 89 ntBASIC-1.16□□□□□ -2.6
TREM1Q9NP99 VN1R91P-201ENST00000594377 169 ntBASIC-1.16□□□□□ -2.6
TREM1Q9NP99 MIR6851-201ENST00000617060 67 ntBASIC-1.16□□□□□ -2.6
TREM1Q9NP99 SNORD115-2-201ENST00000362842 82 ntBASIC-1.17□□□□□ -2.6
TREM1Q9NP99 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.17□□□□□ -2.6
TREM1Q9NP99 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.17□□□□□ -2.6
TREM1Q9NP99 RNY3-201ENST00000365484 102 ntBASIC-1.17□□□□□ -2.6
TREM1Q9NP99 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.18□□□□□ -2.6
TREM1Q9NP99 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.18□□□□□ -2.6
TREM1Q9NP99 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.18□□□□□ -2.6
TREM1Q9NP99 RNU6-901P-201ENST00000384593 106 ntBASIC-1.18□□□□□ -2.6
TREM1Q9NP99 AC099799.1-201ENST00000439809 192 ntBASIC-1.18□□□□□ -2.6
TREM1Q9NP99 MTCO2P24-201ENST00000515611 426 ntBASIC-1.18□□□□□ -2.6
TREM1Q9NP99 AC140658.3-201ENST00000567603 271 ntBASIC-1.18□□□□□ -2.6
TREM1Q9NP99 uc_338.10-201ENST00000621872 182 ntBASIC-1.18□□□□□ -2.6
TREM1Q9NP99 SNORA22.1-201ENST00000362701 134 ntBASIC-1.19□□□□□ -2.6
TREM1Q9NP99 RNA5SP133-201ENST00000363368 119 ntBASIC-1.19□□□□□ -2.6
TREM1Q9NP99 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.19□□□□□ -2.6
TREM1Q9NP99 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.19□□□□□ -2.6
TREM1Q9NP99 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.19□□□□□ -2.6
TREM1Q9NP99 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
TREM1Q9NP99 RNU6-763P-201ENST00000390865 106 ntBASIC-1.19□□□□□ -2.6
TREM1Q9NP99 AL603914.1-201ENST00000401964 204 ntBASIC-1.19□□□□□ -2.6
TREM1Q9NP99 SNORA13-201ENST00000458790 133 ntBASIC-1.19□□□□□ -2.6
TREM1Q9NP99 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.19□□□□□ -2.6
TREM1Q9NP99 RNU6-191P-201ENST00000516295 94 ntBASIC-1.19□□□□□ -2.6
TREM1Q9NP99 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.19□□□□□ -2.6
TREM1Q9NP99 AC013791.1-201ENST00000616619 62 ntBASIC-1.19□□□□□ -2.6
TREM1Q9NP99 MIR6086-201ENST00000638065 55 ntBASIC-1.19□□□□□ -2.6
TREM1Q9NP99 RNU6-502P-201ENST00000362419 108 ntBASIC-1.2□□□□□ -2.6
TREM1Q9NP99 RNU1-141P-201ENST00000364623 158 ntBASIC-1.2□□□□□ -2.6
TREM1Q9NP99 SNORD114-29-201ENST00000364819 70 ntBASIC-1.2□□□□□ -2.6
TREM1Q9NP99 SNORD115-44-201ENST00000365391 82 ntBASIC-1.2□□□□□ -2.6
TREM1Q9NP99 RNU6-900P-201ENST00000384498 102 ntBASIC-1.2□□□□□ -2.6
TREM1Q9NP99 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.2□□□□□ -2.6
TREM1Q9NP99 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.2□□□□□ -2.6
TREM1Q9NP99 RNU6-397P-201ENST00000516226 104 ntBASIC-1.2□□□□□ -2.6
TREM1Q9NP99 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.2□□□□□ -2.6
TREM1Q9NP99 MIR548AE1-201ENST00000583292 70 ntBASIC-1.2□□□□□ -2.6
TREM1Q9NP99 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.2□□□□□ -2.6
TREM1Q9NP99 MTND5P18-201ENST00000445624 1801 ntBASIC-1.21□□□□□ -2.6
TREM1Q9NP99 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.21□□□□□ -2.6
TREM1Q9NP99 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.21□□□□□ -2.6
TREM1Q9NP99 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.21□□□□□ -2.6
TREM1Q9NP99 snoU13.19-201ENST00000459148 104 ntBASIC-1.21□□□□□ -2.6
TREM1Q9NP99 AP000676.1-201ENST00000533307 52 ntBASIC-1.21□□□□□ -2.6
TREM1Q9NP99 AC091932.4-201ENST00000623386 200 ntBASIC-1.21□□□□□ -2.6
TREM1Q9NP99 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.22□□□□□ -2.6
TREM1Q9NP99 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.22□□□□□ -2.6
TREM1Q9NP99 SEPT14P8-201ENST00000508026 178 ntBASIC-1.22□□□□□ -2.6
TREM1Q9NP99 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.22□□□□□ -2.6
TREM1Q9NP99 AC245505.1-201ENST00000556398 224 ntBASIC-1.22□□□□□ -2.6
TREM1Q9NP99 MIR3179-1-201ENST00000578940 84 ntBASIC-1.22□□□□□ -2.6
TREM1Q9NP99 MIR3179-2-201ENST00000579107 84 ntBASIC-1.22□□□□□ -2.6
TREM1Q9NP99 MIR3179-3-201ENST00000579566 84 ntBASIC-1.22□□□□□ -2.6
TREM1Q9NP99 MIR548H5-201ENST00000580314 60 ntBASIC-1.22□□□□□ -2.6
TREM1Q9NP99 MIR3920-201ENST00000581751 86 ntBASIC-1.22□□□□□ -2.6
TREM1Q9NP99 AL121655.1-201ENST00000605811 308 ntBASIC-1.22□□□□□ -2.6
TREM1Q9NP99 MIR3179-4-201ENST00000617599 84 ntBASIC-1.22□□□□□ -2.6
TREM1Q9NP99 U6.109-201ENST00000636749 87 ntBASIC-1.22□□□□□ -2.6
TREM1Q9NP99 RNU6-310P-201ENST00000384655 107 ntBASIC-1.23□□□□□ -2.61
TREM1Q9NP99 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.23□□□□□ -2.61
TREM1Q9NP99 RNU6-893P-201ENST00000458841 100 ntBASIC-1.23□□□□□ -2.61
TREM1Q9NP99 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.23□□□□□ -2.61
TREM1Q9NP99 RNA5SP67-201ENST00000516422 131 ntBASIC-1.23□□□□□ -2.61
TREM1Q9NP99 RNA5SP33-201ENST00000516687 98 ntBASIC-1.23□□□□□ -2.61
TREM1Q9NP99 RNU6-706P-201ENST00000517229 104 ntBASIC-1.23□□□□□ -2.61
TREM1Q9NP99 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
TREM1Q9NP99 RNY1P9-201ENST00000532431 109 ntBASIC-1.23□□□□□ -2.61
TREM1Q9NP99 RNU7-10P-201ENST00000607194 63 ntBASIC-1.23□□□□□ -2.61
TREM1Q9NP99 SNORD113-5-201ENST00000607261 78 ntBASIC-1.23□□□□□ -2.61
TREM1Q9NP99 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.23□□□□□ -2.61
TREM1Q9NP99 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.24□□□□□ -2.61
TREM1Q9NP99 RNU6-431P-201ENST00000383874 107 ntBASIC-1.24□□□□□ -2.61
TREM1Q9NP99 RNU6-890P-201ENST00000384121 107 ntBASIC-1.24□□□□□ -2.61
TREM1Q9NP99 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.24□□□□□ -2.61
TREM1Q9NP99 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.24□□□□□ -2.61
TREM1Q9NP99 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.24□□□□□ -2.61
TREM1Q9NP99 MTND1P34-201ENST00000438556 671 ntBASIC-1.24□□□□□ -2.61
TREM1Q9NP99 snoU13.13-201ENST00000458842 104 ntBASIC-1.24□□□□□ -2.61
TREM1Q9NP99 AC040926.1-201ENST00000530195 238 ntBASIC-1.24□□□□□ -2.61
TREM1Q9NP99 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.24□□□□□ -2.61
TREM1Q9NP99 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.24□□□□□ -2.61
TREM1Q9NP99 YWHAEP2-201ENST00000580066 112 ntBASIC-1.24□□□□□ -2.61
TREM1Q9NP99 MIR5688-201ENST00000580619 83 ntBASIC-1.24□□□□□ -2.61
TREM1Q9NP99 MIR5690-201ENST00000583739 73 ntBASIC-1.24□□□□□ -2.61
TREM1Q9NP99 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 RNU6-154P-201ENST00000384306 106 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 RNU6-937P-201ENST00000384325 106 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 RNU4-70P-201ENST00000384579 139 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 MIR599-201ENST00000385069 95 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 SNORD64-201ENST00000386683 67 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 AC096644.2-201ENST00000429278 159 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms