Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.04□□□□□ -2.24
UPF2Q9HAU5 RNU2-35P-201ENST00000516446 142 ntBASIC1.04□□□□□ -2.24
UPF2Q9HAU5 SEPT14P17-201ENST00000617978 177 ntBASIC1.04□□□□□ -2.24
UPF2Q9HAU5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
UPF2Q9HAU5 SNORA1.1-201ENST00000364671 133 ntBASIC1.03□□□□□ -2.24
UPF2Q9HAU5 Y_RNA.430-201ENST00000384081 110 ntBASIC1.03□□□□□ -2.24
UPF2Q9HAU5 Y_RNA.454-201ENST00000384224 113 ntBASIC1.03□□□□□ -2.24
UPF2Q9HAU5 MIR1276-201ENST00000408707 83 ntBASIC1.03□□□□□ -2.24
UPF2Q9HAU5 RNA5SP144-201ENST00000410846 116 ntBASIC1.03□□□□□ -2.24
UPF2Q9HAU5 AC002429.1-201ENST00000437672 148 ntBASIC1.03□□□□□ -2.24
UPF2Q9HAU5 snoU13.21-201ENST00000459368 105 ntBASIC1.03□□□□□ -2.24
UPF2Q9HAU5 RNU11-2P-201ENST00000516898 142 ntBASIC1.03□□□□□ -2.24
UPF2Q9HAU5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.03□□□□□ -2.24
UPF2Q9HAU5 AC036111.3-201ENST00000526389 112 ntBASIC1.03□□□□□ -2.24
UPF2Q9HAU5 AP001328.1-201ENST00000528550 176 ntBASIC1.03□□□□□ -2.24
UPF2Q9HAU5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.03□□□□□ -2.24
UPF2Q9HAU5 MIR6740-201ENST00000618268 113 ntBASIC1.03□□□□□ -2.24
UPF2Q9HAU5 Y_RNA.171-201ENST00000363760 102 ntBASIC1.02□□□□□ -2.25
UPF2Q9HAU5 RNU6-580P-201ENST00000365159 107 ntBASIC1.02□□□□□ -2.25
UPF2Q9HAU5 SNORD50.2-201ENST00000365465 70 ntBASIC1.02□□□□□ -2.25
UPF2Q9HAU5 Y_RNA.366-201ENST00000365540 102 ntBASIC1.02□□□□□ -2.25
UPF2Q9HAU5 SNORD12C-201ENST00000386307 89 ntBASIC1.02□□□□□ -2.25
UPF2Q9HAU5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
UPF2Q9HAU5 RNU6-351P-201ENST00000516097 100 ntBASIC1.02□□□□□ -2.25
UPF2Q9HAU5 Y_RNA.757-201ENST00000578934 114 ntBASIC1.02□□□□□ -2.25
UPF2Q9HAU5 AC012676.2-201ENST00000619258 186 ntBASIC1.02□□□□□ -2.25
UPF2Q9HAU5 AC008163.1-202ENST00000636004 2889 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 MIR302B-201ENST00000362188 73 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 SNORA22.1-201ENST00000362701 134 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 Y_RNA.114-201ENST00000363265 113 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 SNORD114-27-201ENST00000363766 70 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 RNU6-704P-201ENST00000364162 103 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 SNORA80D-201ENST00000384488 135 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 MIR532-201ENST00000385025 91 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 MT-TN-201ENST00000387400 73 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 RNU6-205P-201ENST00000390858 107 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 MIR1270-201ENST00000459320 83 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.01□□□□□ -2.25
UPF2Q9HAU5 AL078603.1-201ENST00000603824 313 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 FAM71BP1-201ENST00000604431 523 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 AC011603.4-201ENST00000611325 277 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.01□□□□□ -2.25
UPF2Q9HAU5 MIR96-201ENST00000362288 78 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 RNU6-369P-201ENST00000362515 102 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 RNU6-396P-201ENST00000365369 105 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 Y_RNA.470-201ENST00000384307 117 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 MIR563-201ENST00000385080 79 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 MIR146A-201ENST00000385201 99 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 MIR613-201ENST00000385248 95 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 MT-TI-201ENST00000387365 69 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 AL603908.1-201ENST00000406098 201 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 MIR548M-201ENST00000408260 86 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 AL512326.2-201ENST00000426359 151 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 MIR2115-201ENST00000516657 100 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 AC023827.1-201ENST00000569247 97 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 U7.2-201ENST00000607576 63 ntBASIC1□□□□□ -2.25
UPF2Q9HAU5 MIR377-201ENST00000362145 69 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 Y_RNA.218-201ENST00000364218 104 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 Y_RNA.330-201ENST00000365230 109 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 RNU6-690P-201ENST00000365242 106 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 Y_RNA.343-201ENST00000365354 112 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 Y_RNA.508-201ENST00000384502 114 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 Y_RNA.525-201ENST00000384570 113 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 MIR19B1-201ENST00000384829 87 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 SNORD12-201ENST00000391002 90 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 RPS3AP1-201ENST00000413190 320 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 MTATP6P21-201ENST00000440681 189 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.99□□□□□ -2.25
UPF2Q9HAU5 RPS23P4-201ENST00000487908 423 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 UBL5P1-201ENST00000507979 193 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 RNU7-123P-201ENST00000515911 60 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 RNU6-113P-201ENST00000516653 101 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 RNU6-971P-201ENST00000516920 106 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 RNU7-70P-201ENST00000516941 66 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 MIR6734-201ENST00000621166 68 ntBASIC0.99□□□□□ -2.25
UPF2Q9HAU5 Y_RNA.168-201ENST00000363740 102 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 Y_RNA.191-201ENST00000363972 113 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 RNU6-342P-201ENST00000384521 104 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 SNORD38B-201ENST00000384690 67 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 RNU6-1104P-201ENST00000384723 104 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 MIR518E-201ENST00000385252 88 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 SNORA40-201ENST00000388090 126 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 Y_RNA.617-201ENST00000410920 90 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 AC063976.4-201ENST00000421971 163 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 AL158147.1-201ENST00000443970 75 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.98□□□□□ -2.25
UPF2Q9HAU5 snoU13.2-201ENST00000459201 104 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 RNU6-781P-201ENST00000516377 101 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 Y_RNA.692-201ENST00000516627 105 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 AC022523.2-201ENST00000561045 150 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 MIR4305-201ENST00000583252 102 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 MIR4264-201ENST00000583520 66 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 RNU6-94P-201ENST00000607728 107 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 MIR6504-201ENST00000613520 61 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 AC106800.4-201ENST00000614905 153 ntBASIC0.98□□□□□ -2.25
UPF2Q9HAU5 SNORD38B-202ENST00000625943 69 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms