Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.82□□□□□ -2.28
POLR1BQ9H9Y6 RNU6-893P-201ENST00000458841 100 ntBASIC0.82□□□□□ -2.28
POLR1BQ9H9Y6 Y_RNA.644-201ENST00000459006 113 ntBASIC0.82□□□□□ -2.28
POLR1BQ9H9Y6 Y_RNA.674-201ENST00000516362 113 ntBASIC0.82□□□□□ -2.28
POLR1BQ9H9Y6 Y_RNA.700-201ENST00000516806 100 ntBASIC0.82□□□□□ -2.28
POLR1BQ9H9Y6 AL596211.1-201ENST00000569873 2277 ntBASIC0.82□□□□□ -2.28
POLR1BQ9H9Y6 Y_RNA.337-201ENST00000365312 102 ntBASIC0.81□□□□□ -2.28
POLR1BQ9H9Y6 RNU6-47P-201ENST00000383866 107 ntBASIC0.81□□□□□ -2.28
POLR1BQ9H9Y6 RNU6-110P-201ENST00000384508 104 ntBASIC0.81□□□□□ -2.28
POLR1BQ9H9Y6 SNORA20-201ENST00000384662 132 ntBASIC0.81□□□□□ -2.28
POLR1BQ9H9Y6 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
POLR1BQ9H9Y6 RNU6-1190P-201ENST00000410811 104 ntBASIC0.81□□□□□ -2.28
POLR1BQ9H9Y6 SCARNA15-202ENST00000516881 127 ntBASIC0.81□□□□□ -2.28
POLR1BQ9H9Y6 MIR6740-201ENST00000618268 113 ntBASIC0.81□□□□□ -2.28
POLR1BQ9H9Y6 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
POLR1BQ9H9Y6 Y_RNA.274-201ENST00000364714 101 ntBASIC0.8□□□□□ -2.28
POLR1BQ9H9Y6 Y_RNA.297-201ENST00000364950 91 ntBASIC0.8□□□□□ -2.28
POLR1BQ9H9Y6 MIR563-201ENST00000385080 79 ntBASIC0.8□□□□□ -2.28
POLR1BQ9H9Y6 MT-TF-201ENST00000387314 71 ntBASIC0.8□□□□□ -2.28
POLR1BQ9H9Y6 RNU6-1165P-201ENST00000410119 107 ntBASIC0.8□□□□□ -2.28
POLR1BQ9H9Y6 AC133485.1-201ENST00000567176 124 ntBASIC0.8□□□□□ -2.28
POLR1BQ9H9Y6 AC138907.6-201ENST00000568401 126 ntBASIC0.8□□□□□ -2.28
POLR1BQ9H9Y6 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
POLR1BQ9H9Y6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
POLR1BQ9H9Y6 RNU6-369P-201ENST00000362515 102 ntBASIC0.79□□□□□ -2.28
POLR1BQ9H9Y6 RNU6-200P-201ENST00000364743 107 ntBASIC0.79□□□□□ -2.28
POLR1BQ9H9Y6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.79□□□□□ -2.28
POLR1BQ9H9Y6 MIR193B-201ENST00000384907 83 ntBASIC0.79□□□□□ -2.28
POLR1BQ9H9Y6 SNORD99-201ENST00000408612 74 ntBASIC0.79□□□□□ -2.28
POLR1BQ9H9Y6 RNU6-1149P-201ENST00000516810 97 ntBASIC0.79□□□□□ -2.28
POLR1BQ9H9Y6 AC104465.1-201ENST00000611365 139 ntBASIC0.79□□□□□ -2.28
POLR1BQ9H9Y6 MIR6513-201ENST00000621188 64 ntBASIC0.79□□□□□ -2.28
POLR1BQ9H9Y6 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.78□□□□□ -2.28
POLR1BQ9H9Y6 Y_RNA.793-201ENST00000411222 111 ntBASIC0.78□□□□□ -2.28
POLR1BQ9H9Y6 SNORD83.1-201ENST00000411362 77 ntBASIC0.78□□□□□ -2.28
POLR1BQ9H9Y6 RNU6-1219P-201ENST00000516143 112 ntBASIC0.78□□□□□ -2.28
POLR1BQ9H9Y6 RNU6-977P-201ENST00000516411 103 ntBASIC0.78□□□□□ -2.28
POLR1BQ9H9Y6 MIR4771-2-201ENST00000577758 74 ntBASIC0.78□□□□□ -2.28
POLR1BQ9H9Y6 MIR3646-201ENST00000578301 84 ntBASIC0.78□□□□□ -2.28
POLR1BQ9H9Y6 MIR4771-1-201ENST00000582617 74 ntBASIC0.78□□□□□ -2.28
POLR1BQ9H9Y6 AC021613.1-201ENST00000623880 111 ntBASIC0.78□□□□□ -2.28
POLR1BQ9H9Y6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
POLR1BQ9H9Y6 AC023934.1-201ENST00000574529 2389 ntBASIC0.77□□□□□ -2.29
POLR1BQ9H9Y6 Y_RNA.357-201ENST00000365487 109 ntBASIC0.77□□□□□ -2.29
POLR1BQ9H9Y6 Y_RNA.374-201ENST00000365606 101 ntBASIC0.77□□□□□ -2.29
POLR1BQ9H9Y6 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
POLR1BQ9H9Y6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.77□□□□□ -2.29
POLR1BQ9H9Y6 snoU13.21-201ENST00000459368 105 ntBASIC0.77□□□□□ -2.29
POLR1BQ9H9Y6 MIR1273G-201ENST00000577677 100 ntBASIC0.77□□□□□ -2.29
POLR1BQ9H9Y6 MIR6841-201ENST00000637129 72 ntBASIC0.77□□□□□ -2.29
POLR1BQ9H9Y6 AC010332.2-201ENST00000613083 1904 ntBASIC0.76□□□□□ -2.29
POLR1BQ9H9Y6 MIR605-201ENST00000385078 83 ntBASIC0.76□□□□□ -2.29
POLR1BQ9H9Y6 SNORD12C-201ENST00000386307 89 ntBASIC0.76□□□□□ -2.29
POLR1BQ9H9Y6 RNU7-45P-201ENST00000459460 63 ntBASIC0.76□□□□□ -2.29
POLR1BQ9H9Y6 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
POLR1BQ9H9Y6 MIR4804-201ENST00000581683 73 ntBASIC0.76□□□□□ -2.29
POLR1BQ9H9Y6 MIR4676-201ENST00000583078 72 ntBASIC0.76□□□□□ -2.29
POLR1BQ9H9Y6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.76□□□□□ -2.29
POLR1BQ9H9Y6 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
POLR1BQ9H9Y6 AC078938.1-201ENST00000620993 318 ntBASIC0.76□□□□□ -2.29
POLR1BQ9H9Y6 MIR6835-201ENST00000621552 64 ntBASIC0.76□□□□□ -2.29
POLR1BQ9H9Y6 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
POLR1BQ9H9Y6 Y_RNA.240-201ENST00000364469 95 ntBASIC0.75□□□□□ -2.29
POLR1BQ9H9Y6 RNU6-768P-201ENST00000384683 107 ntBASIC0.75□□□□□ -2.29
POLR1BQ9H9Y6 RNU6-239P-201ENST00000390990 99 ntBASIC0.75□□□□□ -2.29
POLR1BQ9H9Y6 RNU1-119P-201ENST00000391122 165 ntBASIC0.75□□□□□ -2.29
POLR1BQ9H9Y6 SNORA75.5-201ENST00000391291 81 ntBASIC0.75□□□□□ -2.29
POLR1BQ9H9Y6 AC015818.7-201ENST00000428754 109 ntBASIC0.75□□□□□ -2.29
POLR1BQ9H9Y6 AC087499.7-201ENST00000441958 109 ntBASIC0.75□□□□□ -2.29
POLR1BQ9H9Y6 RNU6-388P-201ENST00000517012 105 ntBASIC0.75□□□□□ -2.29
POLR1BQ9H9Y6 RNU6-389P-201ENST00000517048 105 ntBASIC0.75□□□□□ -2.29
POLR1BQ9H9Y6 AP002392.1-201ENST00000537692 208 ntBASIC0.75□□□□□ -2.29
POLR1BQ9H9Y6 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
POLR1BQ9H9Y6 MTND5P32-201ENST00000560711 1802 ntBASIC0.75□□□□□ -2.29
POLR1BQ9H9Y6 MIR30D-201ENST00000362283 70 ntBASIC0.74□□□□□ -2.29
POLR1BQ9H9Y6 Y_RNA.29-201ENST00000362570 113 ntBASIC0.74□□□□□ -2.29
POLR1BQ9H9Y6 SNORA22.1-201ENST00000362701 134 ntBASIC0.74□□□□□ -2.29
POLR1BQ9H9Y6 RNU6-818P-201ENST00000364837 108 ntBASIC0.74□□□□□ -2.29
POLR1BQ9H9Y6 RNU6-1318P-201ENST00000365389 103 ntBASIC0.74□□□□□ -2.29
POLR1BQ9H9Y6 RNU4-45P-201ENST00000365469 141 ntBASIC0.74□□□□□ -2.29
POLR1BQ9H9Y6 RNY1P6-201ENST00000384193 109 ntBASIC0.74□□□□□ -2.29
POLR1BQ9H9Y6 MIR520F-201ENST00000384824 87 ntBASIC0.74□□□□□ -2.29
POLR1BQ9H9Y6 MIR938-201ENST00000401216 83 ntBASIC0.74□□□□□ -2.29
POLR1BQ9H9Y6 MIR1257-201ENST00000408490 117 ntBASIC0.74□□□□□ -2.29
POLR1BQ9H9Y6 AC244098.3-201ENST00000424803 96 ntBASIC0.74□□□□□ -2.29
POLR1BQ9H9Y6 RNU7-120P-201ENST00000459334 63 ntBASIC0.74□□□□□ -2.29
POLR1BQ9H9Y6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
POLR1BQ9H9Y6 Y_RNA.52-201ENST00000362760 96 ntBASIC0.73□□□□□ -2.29
POLR1BQ9H9Y6 Y_RNA.785-201ENST00000384290 109 ntBASIC0.73□□□□□ -2.29
POLR1BQ9H9Y6 MIR508-201ENST00000384857 115 ntBASIC0.73□□□□□ -2.29
POLR1BQ9H9Y6 MIR125B2-201ENST00000385128 89 ntBASIC0.73□□□□□ -2.29
POLR1BQ9H9Y6 MIR936-201ENST00000401264 98 ntBASIC0.73□□□□□ -2.29
POLR1BQ9H9Y6 RNA5SP237-201ENST00000410414 113 ntBASIC0.73□□□□□ -2.29
POLR1BQ9H9Y6 RNU7-185P-201ENST00000459215 60 ntBASIC0.73□□□□□ -2.29
POLR1BQ9H9Y6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.73□□□□□ -2.29
POLR1BQ9H9Y6 RNU7-121P-201ENST00000516604 62 ntBASIC0.73□□□□□ -2.29
POLR1BQ9H9Y6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.73□□□□□ -2.29
POLR1BQ9H9Y6 AC020891.4-201ENST00000605745 93 ntBASIC0.73□□□□□ -2.29
POLR1BQ9H9Y6 uc_338.6-201ENST00000613544 171 ntBASIC0.73□□□□□ -2.29
POLR1BQ9H9Y6 SNORD114-23-201ENST00000363536 72 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms