Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 MIR5087-201ENST00000635826 76 ntBASIC0.59□□□□□ -2.31
RPF1Q9H9Y2 RNU6-643P-201ENST00000384018 107 ntBASIC0.58□□□□□ -2.32
RPF1Q9H9Y2 RNU7-80P-201ENST00000459562 61 ntBASIC0.58□□□□□ -2.32
RPF1Q9H9Y2 RNU6-229P-201ENST00000516614 102 ntBASIC0.58□□□□□ -2.32
RPF1Q9H9Y2 SCARNA15-202ENST00000516881 127 ntBASIC0.58□□□□□ -2.32
RPF1Q9H9Y2 AC008608.1-201ENST00000603910 127 ntBASIC0.58□□□□□ -2.32
RPF1Q9H9Y2 AL353621.2-201ENST00000605340 133 ntBASIC0.58□□□□□ -2.32
RPF1Q9H9Y2 AC243829.3-201ENST00000622177 108 ntBASIC0.58□□□□□ -2.32
RPF1Q9H9Y2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 SNORD114-23-201ENST00000363536 72 ntBASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 RNU6-702P-201ENST00000364982 107 ntBASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 Y_RNA.412-201ENST00000384001 104 ntBASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 RNU6-196P-201ENST00000384315 107 ntBASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 AC092628.1-201ENST00000436250 252 ntBASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 RNU7-185P-201ENST00000459215 60 ntBASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 RNU4-71P-201ENST00000516258 113 ntBASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 AC018659.1-201ENST00000551083 169 ntBASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 U6.106-201ENST00000636360 105 ntBASIC0.57□□□□□ -2.32
RPF1Q9H9Y2 RNU6-275P-201ENST00000364910 107 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 RNU6-1336P-201ENST00000383886 109 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 SNORA36.2-201ENST00000384004 127 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 Y_RNA.452-201ENST00000384202 108 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 RNU4-70P-201ENST00000384579 139 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 MIR125B2-201ENST00000385128 89 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 RNU6-1319P-201ENST00000390855 104 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 RNU6-747P-201ENST00000390928 104 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 RNU6-241P-201ENST00000391148 104 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 RNU6-918P-201ENST00000391219 106 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 MIR938-201ENST00000401216 83 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 RNU6-177P-201ENST00000411257 104 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 MRPS18CP4-201ENST00000535821 231 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 MIR4711-201ENST00000578274 70 ntBASIC0.56□□□□□ -2.32
RPF1Q9H9Y2 SNORA20.1-201ENST00000364790 130 ntBASIC0.55□□□□□ -2.32
RPF1Q9H9Y2 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
RPF1Q9H9Y2 Y_RNA.454-201ENST00000384224 113 ntBASIC0.55□□□□□ -2.32
RPF1Q9H9Y2 RNA5SP127-201ENST00000411051 133 ntBASIC0.55□□□□□ -2.32
RPF1Q9H9Y2 AC098934.3-201ENST00000430450 190 ntBASIC0.55□□□□□ -2.32
RPF1Q9H9Y2 RNU6-1149P-201ENST00000516810 97 ntBASIC0.55□□□□□ -2.32
RPF1Q9H9Y2 MIR3612-201ENST00000579753 87 ntBASIC0.55□□□□□ -2.32
RPF1Q9H9Y2 MIR3149-201ENST00000584629 83 ntBASIC0.55□□□□□ -2.32
RPF1Q9H9Y2 MIR6779-201ENST00000617283 64 ntBASIC0.55□□□□□ -2.32
RPF1Q9H9Y2 MIR6841-201ENST00000637129 72 ntBASIC0.55□□□□□ -2.32
RPF1Q9H9Y2 RNU6-47P-201ENST00000383866 107 ntBASIC0.54□□□□□ -2.32
RPF1Q9H9Y2 Y_RNA.430-201ENST00000384081 110 ntBASIC0.54□□□□□ -2.32
RPF1Q9H9Y2 RNU6-1237P-201ENST00000384777 107 ntBASIC0.54□□□□□ -2.32
RPF1Q9H9Y2 MIR624-201ENST00000385217 97 ntBASIC0.54□□□□□ -2.32
RPF1Q9H9Y2 MIR1257-201ENST00000408490 117 ntBASIC0.54□□□□□ -2.32
RPF1Q9H9Y2 RNA5SP261-201ENST00000410536 106 ntBASIC0.54□□□□□ -2.32
RPF1Q9H9Y2 RNU7-102P-201ENST00000458948 62 ntBASIC0.54□□□□□ -2.32
RPF1Q9H9Y2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.54□□□□□ -2.32
RPF1Q9H9Y2 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.54□□□□□ -2.32
RPF1Q9H9Y2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.54□□□□□ -2.32
RPF1Q9H9Y2 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
RPF1Q9H9Y2 AC021613.1-201ENST00000623880 111 ntBASIC0.54□□□□□ -2.32
RPF1Q9H9Y2 MIR18A-201ENST00000362310 71 ntBASIC0.53□□□□□ -2.32
RPF1Q9H9Y2 Y_RNA.75-201ENST00000362927 97 ntBASIC0.53□□□□□ -2.32
RPF1Q9H9Y2 MIR193B-201ENST00000384907 83 ntBASIC0.53□□□□□ -2.32
RPF1Q9H9Y2 MT-TF-201ENST00000387314 71 ntBASIC0.53□□□□□ -2.32
RPF1Q9H9Y2 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.53□□□□□ -2.32
RPF1Q9H9Y2 Z83818.1-201ENST00000603584 150 ntBASIC0.53□□□□□ -2.32
RPF1Q9H9Y2 AL662814.1-201ENST00000617364 121 ntBASIC0.53□□□□□ -2.32
RPF1Q9H9Y2 AC010487.4-201ENST00000637027 61 ntBASIC0.53□□□□□ -2.32
RPF1Q9H9Y2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
RPF1Q9H9Y2 MTND5P32-201ENST00000560711 1802 ntBASIC0.52□□□□□ -2.33
RPF1Q9H9Y2 MIR411-201ENST00000362239 96 ntBASIC0.52□□□□□ -2.33
RPF1Q9H9Y2 Y_RNA.205-201ENST00000364128 113 ntBASIC0.52□□□□□ -2.33
RPF1Q9H9Y2 RNU4-16P-201ENST00000364737 141 ntBASIC0.52□□□□□ -2.33
RPF1Q9H9Y2 RNU6-463P-201ENST00000384340 107 ntBASIC0.52□□□□□ -2.33
RPF1Q9H9Y2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.52□□□□□ -2.33
RPF1Q9H9Y2 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
RPF1Q9H9Y2 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
RPF1Q9H9Y2 RNU7-156P-201ENST00000517214 74 ntBASIC0.52□□□□□ -2.33
RPF1Q9H9Y2 AC090897.1-201ENST00000580909 226 ntBASIC0.52□□□□□ -2.33
RPF1Q9H9Y2 SNORD92-201ENST00000585078 85 ntBASIC0.52□□□□□ -2.33
RPF1Q9H9Y2 AL589743.1-201ENST00000551932 2712 ntBASIC0.51□□□□□ -2.33
RPF1Q9H9Y2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
RPF1Q9H9Y2 SNORA22.1-201ENST00000362701 134 ntBASIC0.51□□□□□ -2.33
RPF1Q9H9Y2 Y_RNA.200-201ENST00000364018 102 ntBASIC0.51□□□□□ -2.33
RPF1Q9H9Y2 RNU6-364P-201ENST00000384387 107 ntBASIC0.51□□□□□ -2.33
RPF1Q9H9Y2 MIR140-201ENST00000385282 100 ntBASIC0.51□□□□□ -2.33
RPF1Q9H9Y2 RNA5SP193-201ENST00000410353 107 ntBASIC0.51□□□□□ -2.33
RPF1Q9H9Y2 RNU7-70P-201ENST00000516941 66 ntBASIC0.51□□□□□ -2.33
RPF1Q9H9Y2 MIR3152-201ENST00000579801 74 ntBASIC0.51□□□□□ -2.33
RPF1Q9H9Y2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
RPF1Q9H9Y2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 Y_RNA.144-201ENST00000363521 113 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 RNU6-447P-201ENST00000410293 104 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 RNU6-1118P-201ENST00000410382 104 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 RNU6-1076P-201ENST00000410397 104 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 RNU6-355P-201ENST00000410427 104 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 RNU6-791P-201ENST00000410467 104 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 RNU6-705P-201ENST00000410601 104 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 RNU6-1100P-201ENST00000410691 104 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 RNU6-860P-201ENST00000410860 104 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 RNU6-1217P-201ENST00000411276 104 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 194.8 ms