Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 RNU7-80P-201ENST00000459562 61 ntBASIC-0.42□□□□□ -2.48
ALX4Q9H161 SNORA20.3-201ENST00000516880 132 ntBASIC-0.42□□□□□ -2.48
ALX4Q9H161 MIR378D2-201ENST00000580636 98 ntBASIC-0.42□□□□□ -2.48
ALX4Q9H161 MIR4432-201ENST00000581823 84 ntBASIC-0.42□□□□□ -2.48
ALX4Q9H161 AL391099.1-201ENST00000624635 187 ntBASIC-0.42□□□□□ -2.48
ALX4Q9H161 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.43□□□□□ -2.48
ALX4Q9H161 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.43□□□□□ -2.48
ALX4Q9H161 SNORD113-8-201ENST00000363497 74 ntBASIC-0.43□□□□□ -2.48
ALX4Q9H161 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.43□□□□□ -2.48
ALX4Q9H161 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.43□□□□□ -2.48
ALX4Q9H161 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.43□□□□□ -2.48
ALX4Q9H161 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.43□□□□□ -2.48
ALX4Q9H161 RNU7-161P-201ENST00000517289 62 ntBASIC-0.43□□□□□ -2.48
ALX4Q9H161 MIR4436A-201ENST00000585278 85 ntBASIC-0.43□□□□□ -2.48
ALX4Q9H161 AC092794.1-201ENST00000612734 582 ntBASIC-0.43□□□□□ -2.48
ALX4Q9H161 RN7SL660P-201ENST00000614852 299 ntBASIC-0.43□□□□□ -2.48
ALX4Q9H161 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 SNORD115-24-201ENST00000363528 82 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 SNORD116-29-201ENST00000384516 83 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 SNORA20-201ENST00000384662 132 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 MIR548L-201ENST00000408303 86 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 RNU6-130P-201ENST00000411112 103 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 RNU2-55P-201ENST00000411146 174 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 PMCHL1-202ENST00000423102 261 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 FGF7P6-202ENST00000451282 293 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 NAMPTP3-201ENST00000569273 224 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 SNORD58B-201ENST00000607313 66 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 PART1_1.1-201ENST00000611761 217 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 AL627230.5-201ENST00000619807 58 ntBASIC-0.44□□□□□ -2.48
ALX4Q9H161 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.45□□□□□ -2.48
ALX4Q9H161 SNORA25.7-201ENST00000364375 127 ntBASIC-0.45□□□□□ -2.48
ALX4Q9H161 U8.6-201ENST00000364939 135 ntBASIC-0.45□□□□□ -2.48
ALX4Q9H161 MT-TL1-201ENST00000386347 75 ntBASIC-0.45□□□□□ -2.48
ALX4Q9H161 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
ALX4Q9H161 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.45□□□□□ -2.48
ALX4Q9H161 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.45□□□□□ -2.48
ALX4Q9H161 BX276092.1-201ENST00000427368 251 ntBASIC-0.45□□□□□ -2.48
ALX4Q9H161 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.45□□□□□ -2.48
ALX4Q9H161 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.45□□□□□ -2.48
ALX4Q9H161 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.45□□□□□ -2.48
ALX4Q9H161 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.45□□□□□ -2.48
ALX4Q9H161 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.45□□□□□ -2.48
ALX4Q9H161 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.45□□□□□ -2.48
ALX4Q9H161 AC007485.1-201ENST00000616755 206 ntBASIC-0.45□□□□□ -2.48
ALX4Q9H161 AC084368.1-201ENST00000620935 65 ntBASIC-0.45□□□□□ -2.48
ALX4Q9H161 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.46□□□□□ -2.48
ALX4Q9H161 MIR101-2-201ENST00000362195 79 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 RNU4-90P-201ENST00000362773 141 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 RNU6-865P-201ENST00000364772 107 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 RNU6-702P-201ENST00000364982 107 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
ALX4Q9H161 RNU6-876P-201ENST00000391295 104 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 HSPE1P25-201ENST00000455484 251 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 RNA5SP153-201ENST00000516498 76 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 RNA5SP169-201ENST00000517268 117 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 DEFB131E-201ENST00000532329 154 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 MIR4263-201ENST00000584745 83 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 AC006006.1-201ENST00000603082 144 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 AC104985.2-201ENST00000620598 500 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 AC091932.4-201ENST00000623386 200 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 MIR6841-201ENST00000637129 72 ntBASIC-0.46□□□□□ -2.48
ALX4Q9H161 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 RNA5SP403-201ENST00000363598 108 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 RNU4-84P-201ENST00000364200 139 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 RNY1P13-201ENST00000365030 105 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 SNORA18-201ENST00000384416 132 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 SNORD41.1-201ENST00000391000 69 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 MTND4LP30-201ENST00000454092 297 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 AC074198.2-201ENST00000508153 258 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 RNU6-507P-201ENST00000516045 100 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 AC040926.1-201ENST00000530195 238 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 MIR376A1-201ENST00000616574 68 ntBASIC-0.47□□□□□ -2.48
ALX4Q9H161 SNORA22.1-201ENST00000362701 134 ntBASIC-0.48□□□□□ -2.49
ALX4Q9H161 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.48□□□□□ -2.49
ALX4Q9H161 RNU4-58P-201ENST00000363192 141 ntBASIC-0.48□□□□□ -2.49
ALX4Q9H161 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.48□□□□□ -2.49
ALX4Q9H161 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.48□□□□□ -2.49
ALX4Q9H161 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.48□□□□□ -2.49
ALX4Q9H161 RNU6-102P-201ENST00000384485 104 ntBASIC-0.48□□□□□ -2.49
ALX4Q9H161 MIR516B1-201ENST00000385211 90 ntBASIC-0.48□□□□□ -2.49
ALX4Q9H161 SNORD110-201ENST00000408189 75 ntBASIC-0.48□□□□□ -2.49
ALX4Q9H161 SNORD75.1-201ENST00000408373 60 ntBASIC-0.48□□□□□ -2.49
ALX4Q9H161 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.48□□□□□ -2.49
ALX4Q9H161 AC244505.6-201ENST00000452829 130 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms